Information for 2-GGAAATTCCMAGG (Motif 3)

A C T G A T C G C G T A C G T A C G T A G A C T A C G T A G T C A G T C G T A C C G T A C T A G A T C G
Reverse Opposite:
A T G C A G T C A C G T A C G T A C T G A C T G G T C A C G T A C G A T A C G T A C G T A T G C A G T C
p-value:1e-15
log p-value:-3.492e+01
Information Content per bp:1.833
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif5.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets37.7 +/- 19.6bp
Average Position of motif in Background68.6 +/- 18.0bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.85
Offset:0
Orientation:forward strand
Alignment:GGAAATTCCMAGG
GGAAATTCCC---
 A C T G A T C G C G T A C G T A C G T A G A C T A C G T A G T C A G T C G T A C C G T A C T A G A T C G
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:GGAAATTCCMAGG
GGAAATTCCC---
 A C T G A T C G C G T A C G T A C G T A G A C T A C G T A G T C A G T C G T A C C G T A C T A G A T C G
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:3
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:GGAAATTCCMAGG
GGAAANCCCC---
 A C T G A T C G C G T A C G T A C G T A G A C T A C G T A G T C A G T C G T A C C G T A C T A G A T C G
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:4
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-GGAAATTCCMAGG
GGGAAATCCCCN--
 A C G T A C T G A T C G C G T A C G T A C G T A G A C T A C G T A G T C A G T C G T A C C G T A C T A G A T C G
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:5
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:GGAAATTCCMAGG
GGAAATCCCC---
 A C T G A T C G C G T A C G T A C G T A G A C T A C G T A G T C A G T C G T A C C G T A C T A G A T C G
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:6
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GGAAATTCCMAGG
NNTGGAAANN------
 A C G T A C G T A C G T A C T G A T C G C G T A C G T A C G T A G A C T A C G T A G T C A G T C G T A C C G T A C T A G A T C G
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:7
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GGAAATTCCMAGG
AATGGAAAAT------
 A C G T A C G T A C G T A C T G A T C G C G T A C G T A C G T A G A C T A C G T A G T C A G T C G T A C C G T A C T A G A T C G
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----GGAAATTCCMAGG
NACAGGAAAT-------
 A C G T A C G T A C G T A C G T A C T G A T C G C G T A C G T A C G T A G A C T A C G T A G T C A G T C G T A C C G T A C T A G A T C G
T A G C C T G A T A G C G T C A A C T G A C T G C G T A C G T A C T G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:9
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GGAAATTCCMAGG
TGGAAAA-------
 A C G T A C T G A T C G C G T A C G T A C G T A G A C T A C G T A G T C A G T C G T A C C G T A C T A G A T C G
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GGAAATTCCMAGG
--GCATTCCAGN-
 A C T G A T C G C G T A C G T A C G T A G A C T A C G T A G T C A G T C G T A C C G T A C T A G A T C G
A C G T A C G T C T A G T G A C C G T A A C G T A C G T A G T C A G T C C G T A C A T G C T A G A C G T