Information for 12-CYGATCGASC (Motif 19)

G A T C A G C T C A T G T G C A A C G T A G T C A T C G T C G A T A G C G A T C
Reverse Opposite:
C T A G A T C G A G C T T A G C T C A G T G C A A C G T G T A C T C G A C T A G
p-value:1e-6
log p-value:-1.467e+01
Information Content per bp:1.509
Number of Target Sequences with motif76.0
Percentage of Target Sequences with motif9.09%
Number of Background Sequences with motif2385.3
Percentage of Background Sequences with motif4.95%
Average Position of motif in Targets44.2 +/- 29.2bp
Average Position of motif in Background49.7 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer

Match Rank:1
Score:0.64
Offset:1
Orientation:forward strand
Alignment:CYGATCGASC-
-NTATYGATCH
 G A T C A G C T C A T G T G C A A C G T A G T C A T C G T C G A T A G C G A T C A C G T
A C G T C T A G C A G T C G T A A C G T A G T C A C T G C G T A A G C T A G T C G A T C

ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CYGATCGASC-
GRTGMTRGAGCC
 A C G T G A T C A G C T C A T G T G C A A C G T A G T C A T C G T C G A T A G C G A T C A C G T
A T C G T C G A G A C T A T C G T G A C A C G T C T A G A C T G C G T A A C T G A G T C G T A C

CUX1/MA0754.1/Jaspar

Match Rank:3
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CYGATCGASC-
-TAATCGATAA
 G A T C A G C T C A T G T G C A A C G T A G T C A T C G T C G A T A G C G A T C A C G T
A C G T G A C T C T G A C T G A A G C T A G T C T C A G C G T A G C A T T G C A G T C A

ZNF354C/MA0130.1/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:CYGATCGASC
---ATCCAC-
 G A T C A G C T C A T G T G C A A C G T A G T C A T C G T C G A T A G C G A T C
A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T

PB0188.1_Tcf7l2_2/Jaspar

Match Rank:5
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CYGATCGASC---
NNANTGATTGATNNNN
 A C G T A C G T A C G T G A T C A G C T C A T G T G C A A C G T A G T C A T C G T C G A T A G C G A T C A C G T A C G T A C G T
G C A T C G A T T G C A T A C G G A C T C T A G G T C A G A C T C G A T T C A G C G T A C G A T A T G C A G C T G A C T A T G C

PH0016.1_Cux1_1/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----CYGATCGASC---
TNAGNTGATCAACCGGT
 A C G T A C G T A C G T A C G T G A T C A G C T C A T G T G C A A C G T A G T C A T C G T C G A T A G C G A T C A C G T A C G T A C G T
G A C T T A G C G C T A A T C G C A T G C G A T C T A G C G T A A G C T G A T C C G T A C T G A A G T C A G T C C T A G T A C G G A C T

CUX2/MA0755.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CYGATCGASC-
-TAATCGATAA
 G A T C A G C T C A T G T G C A A C G T A G T C A T C G T C G A T A G C G A T C A C G T
A C G T G C A T C T G A C T G A A G C T A G T C C T A G C G T A G C A T G C T A G C T A

PB0144.1_Lef1_2/Jaspar

Match Rank:8
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---CYGATCGASC---
NNANTGATTGATNTTN
 A C G T A C G T A C G T G A T C A G C T C A T G T G C A A C G T A G T C A T C G T C G A T A G C G A T C A C G T A C G T A C G T
G C A T C G T A T C G A C A T G G A C T C T A G G T C A G A C T C G A T T A C G C G T A C G A T A T G C A G C T G C A T A T G C

Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer

Match Rank:9
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CYGATCGASC---
---ATTGATTYND
 G A T C A G C T C A T G T G C A A C G T A G T C A T C G T C G A T A G C G A T C A C G T A C G T A C G T
A C G T A C G T A C G T C G T A A C G T A G C T A T C G G T C A A G C T G A C T A G C T T G A C C G A T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.55
Offset:6
Orientation:forward strand
Alignment:CYGATCGASC-
------CAGCC
 G A T C A G C T C A T G T G C A A C G T A G T C A T C G T C G A T A G C G A T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C