Information for 13-ATCCTTGGTGAAT (Motif 15)

C G T A A C G T A G T C A G T C A G C T A C G T A C T G A C T G C G A T C T A G C G T A T C G A A C G T
Reverse Opposite:
C G T A A C G T A C G T A G T C C G T A A G T C A G T C C G T A C T G A A C T G A C T G C G T A A C G T
p-value:1e-9
log p-value:-2.163e+01
Information Content per bp:1.929
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.60%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets46.6 +/- 31.5bp
Average Position of motif in Background52.2 +/- 31.2bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1/MA0154.3/Jaspar

Match Rank:1
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ATCCTTGGTGAAT
ANTCCCTNGGGAAT
 A C G T C G T A A C G T A G T C A G T C A G C T A C G T A C T G A C T G C G A T C T A G C G T A T C G A A C G T
C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T

EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer

Match Rank:2
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ATCCTTGGTGAAT
-TCCCNNGGGACN
 C G T A A C G T A G T C A G T C A G C T A C G T A C T G A C T G C G A T C T A G C G T A T C G A A C G T
A C G T G A C T A G T C A G T C A G T C G A C T C T G A A C T G C T A G A C T G C T G A T A G C G A T C

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----ATCCTTGGTGAAT
AAGATATCCTT-------
 A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G T C A G T C A G C T A C G T A C T G A C T G C G A T C T A G C G T A T C G A A C G T
G C T A G C T A T C A G C G T A A C G T C T G A C G A T A T G C G A T C G C A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0181.1_Spdef_2/Jaspar

Match Rank:4
Score:0.54
Offset:-6
Orientation:forward strand
Alignment:------ATCCTTGGTGAAT
GATAACATCCTAGTAG---
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A G T C A G T C A G C T A C G T A C T G A C T G C G A T C T A G C G T A T C G A A C G T
C T A G C G T A A C G T G C T A C T G A A G T C C G T A C G A T G A T C A G T C A G C T G C T A A C T G G C A T C G T A T C A G A C G T A C G T A C G T

PB0166.1_Sox12_2/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-ATCCTTGGTGAAT--
ANTCCTTTGTCTNNNN
 A C G T C G T A A C G T A G T C A G T C A G C T A C G T A C T G A C T G C G A T C T A G C G T A T C G A A C G T A C G T A C G T
C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:6
Score:0.52
Offset:2
Orientation:forward strand
Alignment:ATCCTTGGTGAAT
--CCTTTGTT---
 C G T A A C G T A G T C A G T C A G C T A C G T A C T G A C T G C G A T C T A G C G T A T C G A A C G T
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T

PB0158.1_Rfx3_2/Jaspar

Match Rank:7
Score:0.51
Offset:-4
Orientation:forward strand
Alignment:----ATCCTTGGTGAAT------
ACTGACCCTTGGTTACCACAAAG
 A C G T A C G T A C G T A C G T C G T A A C G T A G T C A G T C A G C T A C G T A C T G A C T G C G A T C T A G C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T
T G C A A G T C A C G T A T C G G C T A A T G C T A C G A T G C G C A T C G A T T C A G A C T G C G A T C A G T C G T A G A T C T G A C T C G A T G A C T C G A T C G A C G T A A T C G

POL004.1_CCAAT-box/Jaspar

Match Rank:8
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:ATCCTTGGTGAAT
-TGATTGGCTANN
 C G T A A C G T A G T C A G T C A G C T A C G T A C T G A C T G C G A T C T A G C G T A T C G A A C G T
A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:9
Score:0.50
Offset:-3
Orientation:reverse strand
Alignment:---ATCCTTGGTGAAT
BNTGDCCTTG------
 A C G T A C G T A C G T C G T A A C G T A G T C A G T C A G C T A C G T A C T G A C T G C G A T C T A G C G T A T C G A A C G T
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T

MZF1/MA0056.1/Jaspar

Match Rank:10
Score:0.49
Offset:5
Orientation:forward strand
Alignment:ATCCTTGGTGAAT
-----TGGGGA--
 C G T A A C G T A G T C A G T C A G C T A C G T A C T G A C T G C G A T C T A G C G T A T C G A A C G T
A C G T A C G T A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T