Information for 4-RYTMYTCCCCGMAGRC (Motif 5)

C T G A A G T C A C G T G T A C A G T C A C G T A G T C A G T C A G T C A G T C A C T G G T A C C G T A A C T G C T A G A G T C
Reverse Opposite:
A C T G G A T C A G T C A C G T A C G T A G T C A C T G A C T G A C T G A C T G C G T A C T A G A C T G C G T A T C A G A G C T
p-value:1e-11
log p-value:-2.592e+01
Information Content per bp:1.850
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets70.0 +/- 16.4bp
Average Position of motif in Background48.1 +/- 19.3bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:1
Score:0.65
Offset:5
Orientation:forward strand
Alignment:RYTMYTCCCCGMAGRC-
-----TGCCCCCGGGCA
 C T G A A G T C A C G T G T A C A G T C A C G T A G T C A G T C A G T C A G T C A C T G G T A C C G T A A C T G C T A G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T A C G T A G C A G T C A G T C A G T C T G A C T C A G T C A G A T C G A T G C C T G A

MZF1/MA0056.1/Jaspar

Match Rank:2
Score:0.64
Offset:5
Orientation:reverse strand
Alignment:RYTMYTCCCCGMAGRC
-----TCCCCA-----
 C T G A A G T C A C G T G T A C A G T C A C G T A G T C A G T C A G T C A G T C A C T G G T A C C G T A A C T G C T A G A G T C
A C G T A C G T A C G T A C G T A C G T A G C T A G T C G T A C A G T C G T A C T C G A A C G T A C G T A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:3
Score:0.63
Offset:2
Orientation:forward strand
Alignment:RYTMYTCCCCGMAGRC-
--ATTTCCCAGVAKSCY
 C T G A A G T C A C G T G T A C A G T C A C G T A G T C A G T C A G T C A G T C A C T G G T A C C G T A A C T G C T A G A G T C A C G T
A C G T A C G T T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

STAT3/MA0144.2/Jaspar

Match Rank:4
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:RYTMYTCCCCGMAGRC
---TTTCCCAGAAN--
 C T G A A G T C A C G T G T A C A G T C A C G T A G T C A G T C A G T C A G T C A C T G G T A C C G T A A C T G C T A G A G T C
A C G T A C G T A C G T G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G A C G T A C G T

TFAP2B/MA0811.1/Jaspar

Match Rank:5
Score:0.61
Offset:5
Orientation:forward strand
Alignment:RYTMYTCCCCGMAGRC-
-----TGCCCCAGGGCA
 C T G A A G T C A C G T G T A C A G T C A C G T A G T C A G T C A G T C A G T C A C T G G T A C C G T A A C T G C T A G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T A C G A T G C G A T C A G T C A G T C T C G A T C A G T C A G T A C G A T G C C T G A

TFAP2C/MA0524.2/Jaspar

Match Rank:6
Score:0.60
Offset:5
Orientation:forward strand
Alignment:RYTMYTCCCCGMAGRC-
-----TGCCCCAGGGCA
 C T G A A G T C A C G T G T A C A G T C A C G T A G T C A G T C A G T C A G T C A C T G G T A C C G T A A C T G C T A G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T G A C T T A C G T A G C G A T C A G T C A G T C T C G A T C A G C T A G T A C G A T G C C T G A

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:RYTMYTCCCCGMAGRC
----TTCCNGGAAG--
 C T G A A G T C A C G T G T A C A G T C A C G T A G T C A G T C A G T C A G T C A C T G G T A C C G T A A C T G C T A G A G T C
A C G T A C G T A C G T A C G T G C A T C A G T T G A C A G T C T A G C T C A G C A T G G T C A C T G A T C A G A C G T A C G T

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:8
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:RYTMYTCCCCGMAGRC---
----NTCCCCTCAGGGANT
 C T G A A G T C A C G T G T A C A G T C A C G T A G T C A G T C A G T C A G T C A C T G G T A C C G T A A C T G C T A G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A C T C G A T G A T C A T G C G T A C A G T C A G C T T A G C T C G A C T A G A C T G T A C G C G T A G C T A G C A T

ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-RYTMYTCCCCGMAGRC
KGCCCTTCCCCA-----
 A C G T C T G A A G T C A C G T G T A C A G T C A C G T A G T C A G T C A G T C A G T C A C T G G T A C C G T A A C T G C T A G A G T C
C A G T C A T G G A T C G A T C G A T C G A C T A G C T T G A C G A T C G A T C G A T C C T G A A C G T A C G T A C G T A C G T A C G T

Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-RYTMYTCCCCGMAGRC
CNGTCCTCCC-------
 A C G T C T G A A G T C A C G T G T A C A G T C A C G T A G T C A G T C A G T C A G T C A C T G G T A C C G T A A C T G C T A G A G T C
A T G C T C G A T A C G A C G T A T G C A G T C A C G T A G T C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T