Information for 1-CTGTTGCCCCCKG (Motif 3)

A T G C G A C T T A C G A G C T A G C T C T A G A G T C A T G C A G T C G A T C A G T C A C G T A C T G
Reverse Opposite:
T G A C G T C A T C A G C T A G C T A G T A C G C T A G A G T C C T G A T C G A A T G C C T G A A T C G
p-value:1e-11
log p-value:-2.674e+01
Information Content per bp:1.657
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.66%
Number of Background Sequences with motif149.7
Percentage of Background Sequences with motif0.31%
Average Position of motif in Targets57.0 +/- 28.9bp
Average Position of motif in Background50.5 +/- 25.9bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Spz1/MA0111.1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CTGTTGCCCCCKG
GCTGTTACCCT---
 A C G T A T G C G A C T T A C G A G C T A G C T C T A G A G T C A T G C A G T C G A T C A G T C A C G T A C T G
A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T A C G T A C G T A C G T

PB0030.1_Hnf4a_1/Jaspar

Match Rank:2
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CTGTTGCCCCCKG---
NNANTTGACCCCTNNNN
 A C G T A T G C G A C T T A C G A G C T A G C T C T A G A G T C A T G C A G T C G A T C A G T C A C G T A C T G A C G T A C G T A C G T
A C G T G T A C C G T A T C G A A C G T A C G T C T A G G T C A G T A C G T A C A G T C A G T C C A G T A C T G T C A G G T C A T A C G

INSM1/MA0155.1/Jaspar

Match Rank:3
Score:0.62
Offset:4
Orientation:reverse strand
Alignment:CTGTTGCCCCCKG---
----CGCCCCCTGACA
 A T G C G A C T T A C G A G C T A G C T C T A G A G T C A T G C A G T C G A T C A G T C A C G T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C C T A G T G A C A G T C A G T C A T G C A G T C C G A T C A T G T C G A G T A C G T C A

PB0204.1_Zfp740_2/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CTGTTGCCCCCKG----
AAATTCCCCCCGGAAGT
 A T G C G A C T T A C G A G C T A G C T C T A G A G T C A T G C A G T C G A T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T
C T G A C T G A C T G A C A G T G C A T G A T C G A T C A G T C A G T C A T G C A T G C T A C G A T C G C T G A C T G A T C A G A G C T

NR2F1/MA0017.2/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CTGTTGCCCCCKG
CNNTTGACCTTTG
 A T G C G A C T T A C G A G C T A G C T C T A G A G T C A T G C A G T C G A T C A G T C A C G T A C T G
G A T C A G T C A G T C C A G T A G C T A C T G C G T A A G T C A T G C A G C T G A C T C G A T C A T G

PB0118.1_Esrra_2/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CTGTTGCCCCCKG---
NNNNTTGACCCCTNNNN
 A C G T A T G C G A C T T A C G A G C T A G C T C T A G A G T C A T G C A G T C G A T C A G T C A C G T A C T G A C G T A C G T A C G T
C A T G T A G C T A G C G A T C C G A T A G C T T C A G G C T A G T A C G A T C A G T C A G T C C G A T T G A C T A C G G T A C A T G C

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:7
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---CTGTTGCCCCCKG
BRRCVGTTDN------
 A C G T A C G T A C G T A T G C G A C T T A C G A G C T A G C T C T A G A G T C A T G C A G T C G A T C A G T C A C G T A C T G
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0156.1_Plagl1_2/Jaspar

Match Rank:8
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--CTGTTGCCCCCKG--
NNNNGGTACCCCCCANN
 A C G T A C G T A T G C G A C T T A C G A G C T A G C T C T A G A G T C A T G C A G T C G A T C A G T C A C G T A C T G A C G T A C G T
G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CTGTTGCCCCCKG-----
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A T G C G A C T T A C G A G C T A G C T C T A G A G T C A T G C A G T C G A T C A G T C A C G T A C T G A C G T A C G T A C G T A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

SCRT2/MA0744.1/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----CTGTTGCCCCCKG
CCACCTGTTGCAT----
 A C G T A C G T A C G T A C G T A T G C G A C T T A C G A G C T A G C T C T A G A G T C A T G C A G T C G A T C A G T C A C G T A C T G
T A G C G T A C C G T A A T G C A G T C A C G T C A T G A C G T A C G T A C T G T G A C C G T A A G C T A C G T A C G T A C G T A C G T