Information for 12-RGAAARTGKCCST (Motif 28)

C T A G A C T G C G T A C G T A C G T A C T A G A C G T A C T G A C G T A G T C A G T C A T C G A C G T
Reverse Opposite:
C G T A A T G C A C T G A C T G G T C A A G T C C G T A A G T C C G A T A C G T A C G T A G T C A G T C
p-value:1e-7
log p-value:-1.627e+01
Information Content per bp:1.873
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif7.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets47.8 +/- 33.6bp
Average Position of motif in Background53.8 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFATC3/MA0625.1/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---RGAAARTGKCCST
AATGGAAAAT------
 A C G T A C G T A C G T C T A G A C T G C G T A C G T A C G T A C T A G A C G T A C T G A C G T A G T C A G T C A T C G A C G T
C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---RGAAARTGKCCST
NNTGGAAANN------
 A C G T A C G T A C G T C T A G A C T G C G T A C G T A C G T A C T A G A C G T A C T G A C G T A G T C A G T C A T C G A C G T
C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:3
Score:0.59
Offset:1
Orientation:forward strand
Alignment:RGAAARTGKCCST
-CAAGATGGCGGC
 C T A G A C T G C G T A C G T A C G T A C T A G A C G T A C T G A C G T A G T C A G T C A T C G A C G T
A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:4
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---RGAAARTGKCCST
AATGGAAAAT------
 A C G T A C G T A C G T C T A G A C T G C G T A C G T A C G T A C T A G A C G T A C T G A C G T A G T C A G T C A T C G A C G T
T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

NFAT5/MA0606.1/Jaspar

Match Rank:5
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---RGAAARTGKCCST
NATGGAAAAN------
 A C G T A C G T A C G T C T A G A C T G C G T A C G T A C G T A C T A G A C G T A C T G A C G T A G T C A G T C A T C G A C G T
G C T A C T G A C G A T T C A G C T A G C G T A C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

NFATC2/MA0152.1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-RGAAARTGKCCST
TGGAAAA-------
 A C G T C T A G A C T G C G T A C G T A C G T A C T A G A C G T A C T G A C G T A G T C A G T C A T C G A C G T
C G A T A C T G A C T G C G T A C G T A T C G A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--RGAAARTGKCCST
AGAGGAAGTG-----
 A C G T A C G T C T A G A C T G C G T A C G T A C G T A C T A G A C G T A C T G A C G T A G T C A G T C A T C G A C G T
C G T A T A C G T C G A A C T G A C T G C G T A C G T A T A C G A G C T T A C G A C G T A C G T A C G T A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.55
Offset:-5
Orientation:reverse strand
Alignment:-----RGAAARTGKCCST
GAAAGTGAAAGT------
 A C G T A C G T A C G T A C G T A C G T C T A G A C T G C G T A C G T A C G T A C T A G A C G T A C T G A C G T A G T C A G T C A T C G A C G T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:9
Score:0.55
Offset:-6
Orientation:forward strand
Alignment:------RGAAARTGKCCST
AGAAAGTGAAAGTGA----
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G C G T A C G T A C G T A C T A G A C G T A C T G A C G T A G T C A G T C A T C G A C G T
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A A C G T A C G T A C G T A C G T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:RGAAARTGKCCST
-GAAAGTGAAAGT
 C T A G A C T G C G T A C G T A C G T A C T A G A C G T A C T G A C G T A G T C A G T C A T C G A C G T
A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T