Information for 6-CCGGTCCCGG (Motif 27)

T A G C G A T C A T C G C A T G A G C T A G T C A T G C A G T C A C T G A T C G
Reverse Opposite:
T A G C T G A C T C A G T A C G T C A G T C G A G T A C T A G C C T A G A T C G
p-value:1e-7
log p-value:-1.673e+01
Information Content per bp:1.520
Number of Target Sequences with motif30.0
Percentage of Target Sequences with motif4.20%
Number of Background Sequences with motif642.9
Percentage of Background Sequences with motif1.32%
Average Position of motif in Targets49.1 +/- 26.4bp
Average Position of motif in Background49.9 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL011.1_XCPE1/Jaspar

Match Rank:1
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CCGGTCCCGG--
--GGTCCCGCCC
 T A G C G A T C A T C G C A T G A G C T A G T C A T G C A G T C A C T G A T C G A C G T A C G T
A C G T A C G T A C T G A T C G A C G T A G T C A G T C A G T C C T A G A G T C A T G C A G T C

PB0140.1_Irf6_2/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-CCGGTCCCGG----
ACCACTCTCGGTCAC
 A C G T T A G C G A T C A T C G C A T G A G C T A G T C A T G C A G T C A C T G A T C G A C G T A C G T A C G T A C G T
T G C A A G T C A G T C G C T A G T A C C A G T A T G C A G C T A G T C C T A G T C A G C A G T G A T C C T G A T A G C

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:3
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:CCGGTCCCGG---
---TTCCNGGAAG
 T A G C G A T C A T C G C A T G A G C T A G T C A T G C A G T C A C T G A T C G A C G T A C G T A C G T
A C G T A C G T A C G T G C A T C A G T T G A C A G T C T A G C T C A G C A T G G T C A C T G A T C A G

ELK4/MA0076.2/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:forward strand
Alignment:CCGGTCCCGG-
CCACTTCCGGC
 T A G C G A T C A T C G C A T G A G C T A G T C A T G C A G T C A C T G A T C G A C G T
A T G C A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C T G A T C G A G T C

Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCGGTCCCGG-
-NRYTTCCGGY
 T A G C G A T C A T C G C A T G A G C T A G T C A T G C A G T C A C T G A T C G A C G T
A C G T G A T C C T G A A G T C C G A T C G A T G A T C A G T C A C T G A T C G A G C T

Pax2/MA0067.1/Jaspar

Match Rank:6
Score:0.58
Offset:2
Orientation:forward strand
Alignment:CCGGTCCCGG
--AGTCACGC
 T A G C G A T C A T C G C A T G A G C T A G T C A T G C A G T C A C T G A T C G
A C G T A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G

PB0138.1_Irf4_2/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CCGGTCCCGG----
AGTATTCTCGGTTGC
 A C G T T A G C G A T C A T C G C A T G A G C T A G T C A T G C A G T C A C T G A T C G A C G T A C G T A C G T A C G T
T C A G T A C G A G C T G C T A G A C T C A G T G A T C A G C T G A T C T C A G T C A G C G A T G A C T C A T G A T G C

Gabpa/MA0062.2/Jaspar

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CCGGTCCCGG
NCCACTTCCGG
 A C G T T A G C G A T C A T C G C A T G A G C T A G T C A T G C A G T C A C T G A T C G
A C T G A G T C A G T C C T G A A G T C C A G T A C G T A G T C G T A C A C T G A T C G

Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CCGGTCCCGG-
-HACTTCCGGY
 T A G C G A T C A T C G C A T G A G C T A G T C A T G C A G T C A C T G A T C G A C G T
A C G T G A T C T C G A A G T C C G A T C G A T A G T C A T G C A C T G A T C G G A C T

E2F4/MA0470.1/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CCGGTCCCGG--
-NNTTCCCGCCC
 T A G C G A T C A T C G C A T G A G C T A G T C A T G C A G T C A C T G A T C G A C G T A C G T
A C G T A G T C A G T C A G C T A G C T A T G C A T G C A G T C A C T G A T G C A T G C T G A C