Information for 8-YATGTCTGMACTC (Motif 21)

A G T C T G C A A C G T A C T G A G C T A T G C A C G T A T C G G T C A G C T A A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G C G A T A C G T A T G C C G T A A T C G C T G A G T A C G T C A A C G T C T A G
p-value:1e-8
log p-value:-1.874e+01
Information Content per bp:1.775
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.40%
Number of Background Sequences with motif51.0
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets45.7 +/- 20.4bp
Average Position of motif in Background45.7 +/- 23.4bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0060.1_Smad3_1/Jaspar

Match Rank:1
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---YATGTCTGMACTC-
NNTNNTGTCTGGNNTNG
 A C G T A C G T A C G T A G T C T G C A A C G T A C T G A G C T A T G C A C G T A T C G G T C A G C T A A G T C A C G T A G T C A C G T
C A G T A T C G C G A T T C A G T G C A G A C T A C T G C A G T A G T C A C G T T C A G T C A G G C T A G C A T C G A T G A C T C A T G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.62
Offset:1
Orientation:forward strand
Alignment:YATGTCTGMACTC
-CTGTCTGG----
 A G T C T G C A A C G T A C T G A G C T A T G C A C G T A T C G G T C A G C T A A G T C A C G T A G T C
A C G T A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-YATGTCTGMACTC
VBSYGTCTGG----
 A C G T A G T C T G C A A C G T A C T G A G C T A T G C A C G T A T C G G T C A G C T A A G T C A C G T A G T C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:4
Score:0.60
Offset:6
Orientation:reverse strand
Alignment:YATGTCTGMACTC-
------TGACCTYA
 A G T C T G C A A C G T A C T G A G C T A T G C A C G T A T C G G T C A G C T A A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:YATGTCTGMACTC
-TWGTCTGV----
 A G T C T G C A A C G T A C T G A G C T A T G C A C G T A T C G G T C A G C T A A G T C A C G T A G T C
A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:YATGTCTGMACTC--
-----CTGACCTTTG
 A G T C T G C A A C G T A C T G A G C T A T G C A C G T A T C G G T C A G C T A A G T C A C G T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:7
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:YATGTCTGMACTC-
------TGACCYCT
 A G T C T G C A A C G T A C T G A G C T A T G C A C G T A T C G G T C A G C T A A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T T C A G T G C A G T A C T G A C A G C T A G T C A G C T

PB0021.1_Gata3_1/Jaspar

Match Rank:8
Score:0.56
Offset:-3
Orientation:reverse strand
Alignment:---YATGTCTGMACTC------
NNTNANTTCTTATCTCTANANN
 A C G T A C G T A C G T A G T C T G C A A C G T A C T G A G C T A T G C A C G T A T C G G T C A G C T A A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
G T A C A G C T C A G T G C A T T G C A C G A T G A C T A C G T A T G C C G A T C G A T C G T A A C G T A G T C C G A T G T A C G A C T G C T A G C T A C G T A G T C A T C G A

NR4A2/MA0160.1/Jaspar

Match Rank:9
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:YATGTCTGMACTC
-----GTGACCTT
 A G T C T G C A A C G T A C T G A G C T A T G C A C G T A T C G G T C A G C T A A G T C A C G T A G T C
A C G T A C G T A C G T A C G T A C G T A C T G A C G T C T A G C G T A A G T C G T A C A G C T A G C T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:YATGTCTGMACTC----
NSTGTTTRCWCAGBNNN
 A G T C T G C A A C G T A C T G A G C T A T G C A C G T A T C G G T C A G C T A A G T C A C G T A G T C A C G T A C G T A C G T A C G T
G A C T A T G C A C G T C T A G C G A T C A G T C A G T T C G A G A T C G C T A A G T C C G T A T C A G A T G C T A G C G A C T T A C G