Information for 7-CCATGGGGATTTG (Motif 20)

A G T C A G T C G T C A A C G T A C T G A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C T G
Reverse Opposite:
A G T C C G T A C G T A C G T A A C G T A G T C A G T C G T A C A G T C C G T A A C G T A C T G C T A G
p-value:1e-8
log p-value:-1.903e+01
Information Content per bp:1.947
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif4.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets35.2 +/- 20.3bp
Average Position of motif in Background65.7 +/- 14.4bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0015.1_Crx/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CCATGGGGATTTG---
CGTTGGGGATTAGCCT
 A G T C A G T C G T C A A C G T A C T G A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C T G A C G T A C G T A C G T
A G T C A C T G C G A T C G A T T A C G T A C G C T A G A C T G G T C A A C G T C G A T C G T A C T A G A G T C A T G C C A G T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CCATGGGGATTTG
-NNTGTGGATTSS
 A G T C A G T C G T C A A C G T A C T G A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C T G
A C G T C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

MZF1/MA0056.1/Jaspar

Match Rank:3
Score:0.64
Offset:3
Orientation:forward strand
Alignment:CCATGGGGATTTG
---TGGGGA----
 A G T C A G T C G T C A A C G T A C T G A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C T G
A C G T A C G T A C G T A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:4
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:CCATGGGGATTTG-
---TGTGGATTNNN
 A G T C A G T C G T C A A C G T A C T G A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C T G A C G T
A C G T A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Crx/MA0467.1/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CCATGGGGATTTG
--AAGAGGATTAG
 A G T C A G T C G T C A A C G T A C T G A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C T G
A C G T A C G T T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G

PH0139.1_Pitx3/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CCATGGGGATTTG-----
--AGGGGGATTAGCTGCC
 A G T C A G T C G T C A A C G T A C T G A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A C T A G T A C G C T A G C T A G A C T G G T C A A G C T G A C T C G T A C A T G A T G C A C G T C T A G A T G C A T G C

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--CCATGGGGATTTG
TCCCCTGGGGAC---
 A C G T A C G T A G T C A G T C G T C A A C G T A C T G A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C T G
A G C T A G T C A G T C G A T C G A T C C G A T C T A G C T A G C T A G T C A G T G C A G T A C A C G T A C G T A C G T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:8
Score:0.59
Offset:3
Orientation:forward strand
Alignment:CCATGGGGATTTG--
---NGGGGATTTCCC
 A G T C A G T C G T C A A C G T A C T G A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C T G A C G T A C G T
A C G T A C G T A C G T C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

EBF1/MA0154.3/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CCATGGGGATTTG
ANTCCCTNGGGAAT--
 A C G T A C G T A C G T A G T C A G T C G T C A A C G T A C T G A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C T G
C T G A C A G T G A C T G T A C A G T C A G T C G C A T C G A T C T A G T C A G T A C G C T G A T G C A G A C T A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:10
Score:0.58
Offset:5
Orientation:reverse strand
Alignment:CCATGGGGATTTG-
-----GGGATTANN
 A G T C A G T C G T C A A C G T A C T G A C T G A C T G A C T G C G T A A C G T A C G T A C G T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G