Information for 6-CAGGGATTGCCAT (Motif 18)

A G T C C G T A C T A G A C T G A C T G C G T A A C G T A C G T A T C G A G T C A G T C C G T A A G C T
Reverse Opposite:
C T G A A C G T A C T G A C T G A T G C C G T A C G T A C G A T A G T C A G T C A G T C A C G T A C T G
p-value:1e-8
log p-value:-2.008e+01
Information Content per bp:1.934
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets40.5 +/- 18.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.61
Offset:-1
Orientation:reverse strand
Alignment:-CAGGGATTGCCAT
GCAGTGATTT----
 A C G T A G T C C G T A C T A G A C T G A C T G C G T A A C G T A C G T A T C G A G T C A G T C C G T A A G C T
C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CAGGGATTGCCAT
-GGGGATTTCC--
 A G T C C G T A C T A G A C T G A C T G C G T A A C G T A C G T A T C G A G T C A G T C C G T A A G C T
A C G T A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:CAGGGATTGCCAT
CNGTGATTTN---
 A G T C C G T A C T A G A C T G A C T G C G T A A C G T A C G T A T C G A G T C A G T C C G T A A G C T
A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:4
Score:0.59
Offset:1
Orientation:forward strand
Alignment:CAGGGATTGCCAT
-GGGAATTTCC--
 A G T C C G T A C T A G A C T G A C T G C G T A A C G T A C G T A T C G A G T C A G T C C G T A A G C T
A C G T A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C A C G T A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:5
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CAGGGATTGCCAT
AGGGGATTCCCCT
 A G T C C G T A C T A G A C T G A C T G C G T A A C G T A C G T A T C G A G T C A G T C C G T A A G C T
T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CAGGGATTGCCAT-
--GGGATTGCATNN
 A G T C C G T A C T A G A C T G A C T G C G T A A C G T A C G T A T C G A G T C A G T C C G T A A G C T A C G T
A C G T A C G T T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

PH0137.1_Pitx1/Jaspar

Match Rank:7
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---CAGGGATTGCCAT-
TTAGAGGGATTAACAAT
 A C G T A C G T A C G T A G T C C G T A C T A G A C T G A C T G C G T A A C G T A C G T A T C G A G T C A G T C C G T A A G C T A C G T
G A C T A C G T T C G A C T A G C T G A T C A G C T A G C A T G G T C A A C G T G A C T C G T A C T G A G T A C C T G A G T C A G C A T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CAGGGATTGCCAT
NGGGGATTTCCC-
 A G T C C G T A C T A G A C T G A C T G C G T A A C G T A C G T A T C G A G T C A G T C C G T A A G C T
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T

REL/MA0101.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CAGGGATTGCCAT
-GGGGATTTCC--
 A G T C C G T A C T A G A C T G A C T G C G T A A C G T A C G T A T C G A G T C A G T C C G T A A G C T
A C G T A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:10
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:CAGGGATTGCCAT
-GGGGATTCCCCC
 A G T C C G T A C T A G A C T G A C T G C G T A A C G T A C G T A T C G A G T C A G T C C G T A A G C T
A C G T A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C