Information for 3-CGGGWWCCTG (Motif 13)

A G T C A C T G A C T G A C T G C G T A C G A T A G T C A G T C A C G T A C T G
Reverse Opposite:
A G T C C G T A C T A G A C T G C G T A G C A T A G T C A G T C A G T C A C T G
p-value:1e-6
log p-value:-1.546e+01
Information Content per bp:1.901
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif5.63%
Number of Background Sequences with motif32.4
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets43.5 +/- 22.6bp
Average Position of motif in Background52.8 +/- 35.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CGGGWWCCTG--
--ACATCCTGNT
 A G T C A C T G A C T G A C T G C G T A C G A T A G T C A G T C A C G T A C T G A C G T A C G T
A C G T A C G T C T G A A T G C C G T A A C G T A G T C A G T C A C G T A C T G A T C G G C A T

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:2
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CGGGWWCCTG-
-RYHYACCTGB
 A G T C A C T G A C T G A C T G C G T A C G A T A G T C A G T C A C G T A C T G A C G T
A C G T T C A G A G C T G C T A A G T C C G T A G T A C A T G C A C G T A C T G A C G T

GCM1/MA0646.1/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CGGGWWCCTG
CATGCGGGTAC---
 A C G T A C G T A C G T A C G T A G T C A C T G A C T G A C T G C G T A C G A T A G T C A G T C A C G T A C T G
A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C A C G T A C G T A C G T

SNAI2/MA0745.1/Jaspar

Match Rank:4
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:CGGGWWCCTG--
---NCACCTGTN
 A G T C A C T G A C T G A C T G C G T A C G A T A G T C A G T C A C G T A C T G A C G T A C G T
A C G T A C G T A C G T T C G A G T A C C T G A G A T C G A T C C G A T C A T G G A C T G A C T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:5
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----CGGGWWCCTG
CWGGCGGGAA----
 A C G T A C G T A C G T A C G T A G T C A C T G A C T G A C T G C G T A C G A T A G T C A G T C A C G T A C T G
T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T A C G T

Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer

Match Rank:6
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CGGGWWCCTG---
-SNGCACCTGCHS
 A G T C A C T G A C T G A C T G C G T A C G A T A G T C A G T C A C G T A C T G A C G T A C G T A C G T
A C G T T A C G C T A G T A C G A G T C C G T A A G T C A G T C A C G T A C T G A G T C G A T C T A G C

POL011.1_XCPE1/Jaspar

Match Rank:7
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CGGGWWCCTG
GGGCGGGACC---
 A C G T A C G T A C G T A G T C A C T G A C T G A C T G C G T A C G A T A G T C A G T C A C G T A C T G
A C T G A T C G A C T G A G T C A C T G A C T G C T A G C G T A A T G C G T A C A C G T A C G T A C G T

PB0024.1_Gcm1_1/Jaspar

Match Rank:8
Score:0.56
Offset:-7
Orientation:reverse strand
Alignment:-------CGGGWWCCTG
NNNNATGCGGGTNNNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A C T G A C T G C G T A C G A T A G T C A G T C A C G T A C T G
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A A C G T

E2F4/MA0470.1/Jaspar

Match Rank:9
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---CGGGWWCCTG
GGGCGGGAAGG--
 A C G T A C G T A C G T A G T C A C T G A C T G A C T G C G T A C G A T A G T C A G T C A C G T A C T G
A C T G T A C G A T C G A G T C A C T G T A C G T A C G C T G A C T G A T C A G T C A G A C G T A C G T

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:10
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CGGGWWCCTG-
-GGGTACGTGC
 A G T C A C T G A C T G A C T G C G T A C G A T A G T C A G T C A C G T A C T G A C G T
A C G T C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C