Information for 6-TDGAATAGTGTGA (Motif 12)

A C G T C A G T A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C T G C G T A
Reverse Opposite:
A C G T G T A C G T C A A G T C C G T A G T A C C G A T C G T A A C G T A C G T A G T C G A C T C G T A
p-value:1e-6
log p-value:-1.552e+01
Information Content per bp:1.850
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif4.23%
Number of Background Sequences with motif7.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets50.2 +/- 32.3bp
Average Position of motif in Background56.7 +/- 24.1bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TDGAATAGTGTGA--
-CTAATATTGCTAAA
 A C G T C A G T A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C T G C G T A A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:TDGAATAGTGTGA--
-CTAATATTGCTAAA
 A C G T C A G T A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C T G C G T A A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:3
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TDGAATAGTGTGA---
-RGSMTBCTGGGAAAT
 A C G T C A G T A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C T G C G T A A C G T A C G T A C G T
A C G T C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:4
Score:0.57
Offset:4
Orientation:forward strand
Alignment:TDGAATAGTGTGA-
----AAGGTGTKAA
 A C G T C A G T A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A

PB0068.1_Sox1_1/Jaspar

Match Rank:5
Score:0.56
Offset:-5
Orientation:reverse strand
Alignment:-----TDGAATAGTGTGA
NNNTATTGAATTGNNN--
 A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C T G C G T A
T G C A G C T A C A G T G C A T C G T A C G A T C G A T A T C G G C T A C G T A C G A T C G A T C T A G G T C A G C A T C G A T A C G T A C G T

LIN54/MA0619.1/Jaspar

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--TDGAATAGTGTGA
ATTTGAATT------
 A C G T A C G T A C G T C A G T A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C T G C G T A
C G T A A C G T A C G T A G C T C T A G C G T A C G T A G A C T G A C T A C G T A C G T A C G T A C G T A C G T A C G T

PB0165.1_Sox11_2/Jaspar

Match Rank:7
Score:0.56
Offset:1
Orientation:forward strand
Alignment:TDGAATAGTGTGA--
-AAAATTGTTATGAA
 A C G T C A G T A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C T G C G T A A C G T A C G T
A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

TEAD4/MA0809.1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TDGAATAGTGTGA
NTGGAATGTN----
 A C G T A C G T C A G T A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C T G C G T A
C T G A G C A T C T A G T C A G G C T A C G T A G C A T A C T G G A C T A C T G A C G T A C G T A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:TDGAATAGTGTGA-
----ATGGGGTGAT
 A C G T C A G T A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T

TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TDGAATAGTGTGA
NCTGGAATGC-----
 A C G T A C G T A C G T C A G T A C T G C G T A C G T A A C G T C G T A A C T G A C G T A C T G A C G T A C T G C G T A
G A T C G T A C C G A T A C T G A C T G C G T A C G T A A C G T A C T G G A T C A C G T A C G T A C G T A C G T A C G T