Information for 3-TCTTKCTKWMCRT (Motif 9)

A C G T G T A C A G C T A C G T A C T G A G T C A C G T A C T G C G A T T G A C G A T C C T A G A C G T
Reverse Opposite:
C G T A G A T C C A T G A C T G G C T A G T A C C G T A A C T G T G A C G T C A C T G A A C T G C G T A
p-value:1e-7
log p-value:-1.685e+01
Information Content per bp:1.832
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif2.75%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.6 +/- 27.5bp
Average Position of motif in Background59.3 +/- 9.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Foxk1/MA0852.1/Jaspar

Match Rank:1
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TCTTKCTKWMCRT---
NNNTTTGTTTACATTTN
 A C G T A C G T G T A C A G C T A C G T A C T G A G T C A C G T A C T G C G A T T G A C G A T C C T A G A C G T A C G T A C G T A C G T
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T

PB0018.1_Foxk1_1/Jaspar

Match Rank:2
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-TCTTKCTKWMCRT---
NNNTTTGTTTACATTTN
 A C G T A C G T G T A C A G C T A C G T A C T G A G T C A C G T A C T G C G A T T G A C G A T C C T A G A C G T A C G T A C G T A C G T
T A G C A G C T A T C G G C A T C G A T A C G T C T A G A C G T C G A T A C G T C G T A A G T C G T C A G C A T G C A T G A C T G C A T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:3
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TCTTKCTKWMCRT
CACTTCCTGT----
 A C G T A C G T G T A C A G C T A C G T A C T G A G T C A C G T A C T G C G A T T G A C G A T C C T A G A C G T
A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T A C G T A C G T A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:4
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TCTTKCTKWMCRT---
NNNTTTGTTTACTTTTN
 A C G T A C G T G T A C A G C T A C G T A C T G A G T C A C G T A C T G C G A T T G A C G A T C C T A G A C G T A C G T A C G T A C G T
T A C G G A C T A T G C C G A T C G A T C G A T C T A G C G A T C A G T C A G T C T G A A G T C G C A T G C A T C G A T C G A T C G A T

PB0207.1_Zic3_2/Jaspar

Match Rank:5
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--TCTTKCTKWMCRT
NNTCCTGCTGTGNNN
 A C G T A C G T A C G T G T A C A G C T A C G T A C T G A G T C A C G T A C T G C G A T T G A C G A T C C T A G A C G T
G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PB0019.1_Foxl1_1/Jaspar

Match Rank:6
Score:0.51
Offset:-1
Orientation:reverse strand
Alignment:-TCTTKCTKWMCRT---
NNNTTTGTTTACATTTN
 A C G T A C G T G T A C A G C T A C G T A C T G A G T C A C G T A C T G C G A T T G A C G A T C C T A G A C G T A C G T A C G T A C G T
T G C A A G T C A T G C G C A T C G A T C G A T C T A G A G C T C G A T A C G T C G T A G A T C C G T A G C A T C G A T G C A T G C T A

NRL/MA0842.1/Jaspar

Match Rank:7
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-TCTTKCTKWMCRT
AATTTGCTGAC---
 A C G T A C G T G T A C A G C T A C G T A C T G A G T C A C G T A C T G C G A T T G A C G A T C C T A G A C G T
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T

ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer

Match Rank:8
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-TCTTKCTKWMCRT
CACTTCCTGT----
 A C G T A C G T G T A C A G C T A C G T A C T G A G T C A C G T A C T G C G A T T G A C G A T C C T A G A C G T
A T G C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T A C G T A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:9
Score:0.50
Offset:-4
Orientation:reverse strand
Alignment:----TCTTKCTKWMCRT
TNNTCCTTTGTTCTNNT
 A C G T A C G T A C G T A C G T A C G T G T A C A G C T A C G T A C T G A G T C A C G T A C T G C G A T T G A C G A T C C T A G A C G T
C G A T C G T A T C A G A G C T A G T C A G T C C G A T A C G T C G A T T A C G C G A T A G C T G A T C G C A T G A C T T G A C C A G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.50
Offset:2
Orientation:reverse strand
Alignment:TCTTKCTKWMCRT-
--BTVATTWGCATA
 A C G T G T A C A G C T A C G T A C T G A G T C A C G T A C T G C G A T T G A C G A T C C T A G A C G T A C G T
A C G T A C G T A G T C C A G T T G C A G T C A A C G T A G C T C G A T T C A G G T A C C G T A A C G T C T G A