Information for 2-TGGCTGGCGC (Motif 12)

A C G T C T A G A C T G G T A C A G C T A C T G A C T G A G T C C A T G G T A C
Reverse Opposite:
A C T G G T A C A C T G A G T C A G T C C T G A A C T G A G T C A G T C C G T A
p-value:1e-5
log p-value:-1.167e+01
Information Content per bp:1.833
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif2.75%
Number of Background Sequences with motif17.6
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets31.6 +/- 20.7bp
Average Position of motif in Background50.9 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL006.1_BREu/Jaspar

Match Rank:1
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:TGGCTGGCGC---
-----GGCGCGCT
 A C G T C T A G A C T G G T A C A G C T A C T G A C T G A G T C C A T G G T A C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T A C G A G T C A C T G A G T C A T C G A T G C A C G T

Hic1/MA0739.1/Jaspar

Match Rank:2
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:TGGCTGGCGC
-GGTTGGCAT
 A C G T C T A G A C T G G T A C A G C T A C T G A C T G A G T C C A T G G T A C
A C G T T C A G T A C G A G C T C A G T C A T G A T C G A G T C T C G A A G C T

NFIX/MA0671.1/Jaspar

Match Rank:3
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGGCTGGCGC-
--NTTGGCANN
 A C G T C T A G A C T G G T A C A G C T A C T G A C T G A G T C C A T G G T A C A C G T
A C G T A C G T A T G C G A C T A C G T A C T G T A C G T G A C C G T A G T A C A T C G

PB0029.1_Hic1_1/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TGGCTGGCGC---
NGTAGGTTGGCATNNN
 A C G T A C G T A C G T A C G T C T A G A C T G G T A C A G C T A C T G A C T G A G T C C A T G G T A C A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TGGCTGGCGC
---TTGGCA-
 A C G T C T A G A C T G G T A C A G C T A C T G A C T G A G T C C A T G G T A C
A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:6
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGGCTGGCGC-------
CCTTCGGCGCCAAAAGG
 A C G T C T A G A C T G G T A C A G C T A C T G A C T G A G T C C A T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:7
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TGGCTGGCGC
RGKGGGCGGAGC
 A C G T A C G T A C G T C T A G A C T G G T A C A G C T A C T G A C T G A G T C C A T G G T A C
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

PB0113.1_E2F3_2/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGGCTGGCGC-------
AGCTCGGCGCCAAAAGC
 A C G T C T A G A C T G G T A C A G C T A C T G A C T G A G T C C A T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C

PB0164.1_Smad3_2/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TGGCTGGCGC------
NAGANTGGCGGGGNGNA
 A C G T A C G T C T A G A C T G G T A C A G C T A C T G A C T G A G T C C A T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

E2F1/MA0024.3/Jaspar

Match Rank:10
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TGGCTGGCGC----
--TTTGGCGCCAAA
 A C G T C T A G A C T G G T A C A G C T A C T G A C T G A G T C C A T G G T A C A C G T A C G T A C G T A C G T
A C G T A C G T G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A