Information for 3-ATSTTAATACSGG (Motif 5)

C T G A A C G T A T C G A G C T C G A T C G T A C T G A A C G T C T G A T G A C A T C G A C T G C T A G
Reverse Opposite:
A G T C T G A C A T G C A C T G A G C T C G T A A G C T C G A T G C T A T C G A A T G C G T C A A G C T
p-value:1e-13
log p-value:-2.998e+01
Information Content per bp:1.692
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif9.80%
Number of Background Sequences with motif64.8
Percentage of Background Sequences with motif0.24%
Average Position of motif in Targets52.6 +/- 24.9bp
Average Position of motif in Background56.0 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.11
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU5F1B/MA0792.1/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-ATSTTAATACSGG
TATGCAAAT-----
 A C G T C T G A A C G T A T C G A G C T C G A T C G T A C T G A A C G T C T G A T G A C A T C G A C T G C T A G
G A C T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-ATSTTAATACSGG
TATGCWAATBAV--
 A C G T C T G A A C G T A T C G A G C T C G A T C G T A C T G A A C G T C T G A T G A C A T C G A C T G C T A G
G A C T C G T A A C G T A C T G A G T C C G T A C T G A C G T A C A G T A C G T G T C A T C A G A C G T A C G T

POU3F4/MA0789.1/Jaspar

Match Rank:3
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-ATSTTAATACSGG
TATGCAAAT-----
 A C G T C T G A A C G T A T C G A G C T C G A T C G T A C T G A A C G T C T G A T G A C A T C G A C T G C T A G
G C A T C T G A G A C T C A T G A G T C C G T A G C T A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer

Match Rank:4
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-ATSTTAATACSGG
WATGCAAATGAG--
 A C G T C T G A A C G T A T C G A G C T C G A T C G T A C T G A A C G T C T G A T G A C A T C G A C T G C T A G
G C A T C G T A C G A T A C T G A G T C G C T A C T G A C G T A C A G T A C T G C G T A T C A G A C G T A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:5
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-ATSTTAATACSGG
TATGTAAATAT---
 A C G T C T G A A C G T A T C G A G C T C G A T C G T A C T G A A C G T C T G A T G A C A T C G A C T G C T A G
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T A C G T A C G T A C G T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--ATSTTAATACSGG
TTATGCAAAT-----
 A C G T A C G T C T G A A C G T A T C G A G C T C G A T C G T A C T G A A C G T C T G A T G A C A T C G A C T G C T A G
C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T A C G T A C G T A C G T A C G T A C G T

POU3F1/MA0786.1/Jaspar

Match Rank:7
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--ATSTTAATACSGG
TTATGCAAATTA---
 A C G T A C G T C T G A A C G T A T C G A G C T C G A T C G T A C T G A A C G T C T G A T G A C A T C G A C T G C T A G
C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A A C G T A C G T A C G T

POU2F1/MA0785.1/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---ATSTTAATACSGG
AATATGCAAATT----
 A C G T A C G T A C G T C T G A A C G T A T C G A G C T C G A T C G T A C T G A A C G T C T G A T G A C A T C G A C T G C T A G
G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T A C G T A C G T A C G T A C G T

PH0144.1_Pou2f2/Jaspar

Match Rank:9
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----ATSTTAATACSGG
TTGTATGCAAATTAGA-
 A C G T A C G T A C G T A C G T C T G A A C G T A T C G A G C T C G A T C G T A C T G A A C G T C T G A T G A C A T C G A C T G C T A G
A G C T G C A T C A T G G C A T C G T A A G C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A C T A G T G C A A C G T

POU3F2/MA0787.1/Jaspar

Match Rank:10
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--ATSTTAATACSGG
TTATGCAAATTA---
 A C G T A C G T C T G A A C G T A T C G A G C T C G A T C G T A C T G A A C G T C T G A T G A C A T C G A C T G C T A G
C G A T G C A T T C G A G A C T C A T G A G T C G C T A C G T A G C T A C G A T A C G T G C T A A C G T A C G T A C G T