p-value: | 1e-14 |
log p-value: | -3.279e+01 |
Information Content per bp: | 1.822 |
Number of Target Sequences with motif | 5.0 |
Percentage of Target Sequences with motif | 4.90% |
Number of Background Sequences with motif | 2.0 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 43.4 +/- 34.4bp |
Average Position of motif in Background | 44.2 +/- 33.1bp |
Strand Bias (log2 ratio + to - strand density) | -2.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Nkx2-5(var.2)/MA0503.1/Jaspar
Match Rank: | 1 |
Score: | 0.55 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | GGMGSTWSASTGW-- ----CTTGAGTGGCT |
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Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer
Match Rank: | 2 |
Score: | 0.55 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | GGMGSTWSASTGW- ----BTBRAGTGSN |
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POL013.1_MED-1/Jaspar
Match Rank: | 3 |
Score: | 0.54 |
Offset: | -1 |
Orientation: | reverse strand |
Alignment: | -GGMGSTWSASTGW CGGAGC-------- |
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Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer
Match Rank: | 4 |
Score: | 0.54 |
Offset: | 5 |
Orientation: | forward strand |
Alignment: | GGMGSTWSASTGW-- -----TTRAGTGSYK |
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PB0005.1_Bbx_1/Jaspar
Match Rank: | 5 |
Score: | 0.54 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GGMGSTWSASTGW---- --NANTTCATTGAATTA |
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Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer
Match Rank: | 6 |
Score: | 0.53 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | GGMGSTWSASTGW- ----CTYRAGTGSY |
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Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer
Match Rank: | 7 |
Score: | 0.52 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | GGMGSTWSASTGW-- -----TTGAGTGSTT |
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POL002.1_INR/Jaspar
Match Rank: | 8 |
Score: | 0.51 |
Offset: | 5 |
Orientation: | reverse strand |
Alignment: | GGMGSTWSASTGW -----NNNANTGA |
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PB0156.1_Plagl1_2/Jaspar
Match Rank: | 9 |
Score: | 0.50 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GGMGSTWSASTGW GCTGGGGGGTACCCCTT |
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PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer
Match Rank: | 10 |
Score: | 0.50 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GGMGSTWSASTGW----- TTTMCGCTTSABTGAACACN |
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