Information for 13-CAGGGCCAGGTAG (Motif 17)

G T A C C G T A A C T G A C T G A C T G A G T C A G T C C G T A A C T G A C T G A G C T C T G A A C T G
Reverse Opposite:
A G T C A G C T C T G A A G T C A G T C A C G T A C T G A C T G A G T C A G T C A G T C A C G T A C T G
p-value:1e-6
log p-value:-1.528e+01
Information Content per bp:1.944
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif2.94%
Number of Background Sequences with motif3.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.2 +/- 24.2bp
Average Position of motif in Background39.7 +/- 19.9bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer

Match Rank:1
Score:0.63
Offset:5
Orientation:forward strand
Alignment:CAGGGCCAGGTAG--
-----VCAGGTRDRY
 G T A C C G T A A C T G A C T G A C T G A G T C A G T C C G T A A C T G A C T G A G C T C T G A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G C A G T A C C G T A A T C G A C T G A C G T C T A G C G A T T C G A A G T C

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CAGGGCCAGGTAG
CAAGGHCANV---
 G T A C C G T A A C T G A C T G A C T G A G T C A G T C C G T A A C T G A C T G A G C T C T G A A C T G
T G A C C G T A C T G A A C T G A C T G G A C T G A T C T G C A G T A C T A C G A C G T A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:3
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----CAGGGCCAGGTAG
AAGTTCAAGGTCAGC---
 A C G T A C G T A C G T A C G T A C G T G T A C C G T A A C T G A C T G A C T G A G T C A G T C C G T A A C T G A C T G A G C T C T G A A C T G
T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CAGGGCCAGGTAG-
CAGGCCNNGGCCNN
 G T A C C G T A A C T G A C T G A C T G A G T C A G T C C G T A A C T G A C T G A G C T C T G A A C T G A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:5
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--CAGGGCCAGGTAG
NTCAAGGTCA-----
 A C G T A C G T G T A C C G T A A C T G A C T G A C T G A G T C A G T C C G T A A C T G A C T G A G C T C T G A A C T G
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:6
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CAGGGCCAGGTAG
BTCAAGGTCA-----
 A C G T A C G T G T A C C G T A A C T G A C T G A C T G A G T C A G T C C G T A A C T G A C T G A G C T C T G A A C T G
A C G T G A C T T A G C C G T A C T G A C A T G C T A G G A C T G A T C C G T A A C G T A C G T A C G T A C G T A C G T

p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CAGGGCCAGGTAG
ACATGCCCGGGCAT
 A C G T G T A C C G T A A C T G A C T G A C T G A G T C A G T C C G T A A C T G A C T G A G C T C T G A A C T G
C T G A T A G C G C T A C G A T A T C G A G T C G A T C G A T C C T A G T C A G T C A G G T A C G C T A C A G T

E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:CAGGGCCAGGTAG-
----NNCAGGTGNN
 G T A C C G T A A C T G A C T G A C T G A G T C A G T C C G T A A C T G A C T G A G C T C T G A A C T G A C G T
A C G T A C G T A C G T A C G T C A G T T A C G A G T C C G T A A C T G A C T G A C G T A C T G A C G T T A C G

PB0039.1_Klf7_1/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--CAGGGCCAGGTAG-
NNAGGGGCGGGGTNNA
 A C G T A C G T G T A C C G T A A C T G A C T G A C T G A G T C A G T C C G T A A C T G A C T G A G C T C T G A A C T G A C G T
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A

PB0153.1_Nr2f2_2/Jaspar

Match Rank:10
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CAGGGCCAGGTAG
CGCGCCGGGTCACGTA-
 A C G T A C G T A C G T A C G T G T A C C G T A A C T G A C T G A C T G A G T C A G T C C G T A A C T G A C T G A G C T C T G A A C T G
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A A C G T