Information for 3-CGGTTCGGTT (Motif 9)

T G A C T C A G A T C G A G C T C A G T G T A C T C A G A C T G G C A T A G C T
Reverse Opposite:
T C G A C G T A T G A C A G T C C A T G G T C A T C G A T A G C A G T C A C T G
p-value:1e-9
log p-value:-2.188e+01
Information Content per bp:1.670
Number of Target Sequences with motif42.0
Percentage of Target Sequences with motif4.75%
Number of Background Sequences with motif733.2
Percentage of Background Sequences with motif1.53%
Average Position of motif in Targets59.4 +/- 25.9bp
Average Position of motif in Background49.2 +/- 33.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:1
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CGGTTCGGTT
TGTCGGTT-----
 A C G T A C G T A C G T T G A C T C A G A T C G A G C T C A G T G T A C T C A G A C T G G C A T A G C T
C G A T C A T G C G A T G A T C T C A G A T C G G C A T G C A T A C G T A C G T A C G T A C G T A C G T

IRF8/MA0652.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CGGTTCGGTT----
AGTTTCGGTTTCGN
 T G A C T C A G A T C G A G C T C A G T G T A C T C A G A C T G G C A T A G C T A C G T A C G T A C G T A C G T
C T G A T A C G A C G T G C A T A G C T A G T C C T A G A T C G C G A T C G A T A C G T G A T C C T A G C T G A

PB0035.1_Irf5_1/Jaspar

Match Rank:3
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--CGGTTCGGTT---
NTGGTTTCGGTTNNN
 A C G T A C G T T G A C T C A G A T C G A G C T C A G T G T A C T C A G A C T G G C A T A G C T A C G T A C G T A C G T
A G C T G A C T C T A G A C T G A C G T G C A T A G C T A G T C C T A G C T A G G A C T G C A T G A C T G C T A C G A T

BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer

Match Rank:4
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CGGTTCGGTT
BRRCVGTTDN---
 A C G T A C G T A C G T T G A C T C A G A T C G A G C T C A G T G T A C T C A G A C T G G C A T A G C T
A G C T C T A G C T A G A G T C T G C A A C T G A C G T C G A T C G T A T C A G A C G T A C G T A C G T

IRF9/MA0653.1/Jaspar

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:CGGTTCGGTT-----
AGTTTCGGTTTCGTT
 T G A C T C A G A T C G A G C T C A G T G T A C T C A G A C T G G C A T A G C T A C G T A C G T A C G T A C G T A C G T
C T G A A T C G C G A T C G A T A C G T G A T C C T A G A T C G C A G T C G A T A C G T G A T C C T A G C G A T C G A T

POL001.1_MTE/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CGGTTCGGTT-----
NCGACCGCTCCGCTCGAAA
 A C G T A C G T A C G T A C G T T G A C T C A G A T C G A G C T C A G T G T A C T C A G A C T G G C A T A G C T A C G T A C G T A C G T A C G T A C G T
T C A G A T G C C T A G C G T A A T G C A G T C A C T G G A C T A C G T A T G C A T G C A C T G A G T C A C G T A G T C A C T G C T G A C T G A T C G A

PB0033.1_Irf3_1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-CGGTTCGGTT---
CAGTTTCGNTTCTN
 A C G T T G A C T C A G A T C G A G C T C A G T G T A C T C A G A C T G G C A T A G C T A C G T A C G T A C G T
A G T C C T G A A T C G C A G T C G A T A C G T A G T C A T C G C A T G C G A T G C A T G A T C G A C T T A G C

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CGGTTCGGTT--
RSTTTCRSTTTC
 T G A C T C A G A T C G A G C T C A G T G T A C T C A G A C T G G C A T A G C T A C G T A C G T
T C G A A T G C A C G T A C G T A G C T A G T C C T G A A T G C G C A T G A C T A G C T G A T C

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:CGGTTCGGTT--
AGTTTCAKTTTC
 T G A C T C A G A T C G A G C T C A G T G T A C T C A G A C T G G C A T A G C T A C G T A C G T
C T G A T A C G G C A T A G C T A G C T A G T C T C G A A C T G C A G T A G C T A G C T G A T C

RUNX2/MA0511.2/Jaspar

Match Rank:10
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CGGTTCGGTT-
--TTGCGGTTT
 T G A C T C A G A T C G A G C T C A G T G T A C T C A G A C T G G C A T A G C T A C G T
A C G T A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T