Information for 2-GCCTGGAAAGTCACTG (Motif 3)

A C T G A T G C A G T C A G C T C T A G C T A G T G C A C T G A C G T A T A C G G C A T G A T C G C T A A G T C C A G T A T C G
Reverse Opposite:
T A G C G T C A T C A G C G A T C A T G C G T A A G T C A C G T G A C T A C G T A G T C A G T C T C G A T A C G A T C G G T A C
p-value:1e-11
log p-value:-2.585e+01
Information Content per bp:1.659
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.36%
Number of Background Sequences with motif35.6
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets56.4 +/- 24.9bp
Average Position of motif in Background51.1 +/- 23.0bp
Strand Bias (log2 ratio + to - strand density)1.2
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RELA/MA0107.1/Jaspar

Match Rank:1
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:GCCTGGAAAGTCACTG
----GGAAATTCCC--
 A C T G A T G C A G T C A G C T C T A G C T A G T G C A C T G A C G T A T A C G G C A T G A T C G C T A A G T C C A G T A T C G
A C G T A C G T A C G T A C G T A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T

ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:2
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GCCTGGAAAGTCACTG--
---AGGGAAGTCATTTCT
 A C T G A T G C A G T C A G C T C T A G C T A G T G C A C T G A C G T A T A C G G C A T G A T C G C T A A G T C C A G T A T C G A C G T A C G T
A C G T A C G T A C G T C T G A C T A G C T A G T C A G C G T A C T G A C T A G A G C T G T A C C T G A A G C T A G C T A C G T G A T C G A C T

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:3
Score:0.56
Offset:4
Orientation:forward strand
Alignment:GCCTGGAAAGTCACTG
----GGAAATTCCC--
 A C T G A T G C A G T C A G C T C T A G C T A G T G C A C T G A C G T A T A C G G C A T G A T C G C T A A G T C C A G T A T C G
A C G T A C G T A C G T A C G T A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:GCCTGGAAAGTCACTG
----GGAAATCCCC--
 A C T G A T G C A G T C A G C T C T A G C T A G T G C A C T G A C G T A T A C G G C A T G A T C G C T A A G T C C A G T A T C G
A C G T A C G T A C G T A C G T C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T

NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GCCTGGAAAGTCACTG
-AATGGAAAAT-----
 A C T G A T G C A G T C A G C T C T A G C T A G T G C A C T G A C G T A T A C G G C A T G A T C G C T A A G T C C A G T A T C G
A C G T T C G A T C G A A G C T A C T G A C T G C G T A C G T A G T C A T G C A G C A T A C G T A C G T A C G T A C G T A C G T

NFATC3/MA0625.1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:GCCTGGAAAGTCACTG
-AATGGAAAAT-----
 A C T G A T G C A G T C A G C T C T A G C T A G T G C A C T G A C G T A T A C G G C A T G A T C G C T A A G T C C A G T A T C G
A C G T C G T A C T G A G A C T T A C G C A T G T C G A C G T A G C T A C T G A G C A T A C G T A C G T A C G T A C G T A C G T

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:7
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GCCTGGAAAGTCACTG
TTTCCTGGAAAGNNN---
 A C G T A C G T A C T G A T G C A G T C A G C T C T A G C T A G T G C A C T G A C G T A T A C G G C A T G A T C G C T A A G T C C A G T A T C G
G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A A C G T A C G T A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:8
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--GCCTGGAAAGTCACTG
TTTCCTAGAAAGCA----
 A C G T A C G T A C T G A T G C A G T C A G C T C T A G C T A G T G C A C T G A C G T A T A C G G C A T G A T C G C T A A G T C C A G T A T C G
C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A A C G T A C G T A C G T A C G T

NFATC1/MA0624.1/Jaspar

Match Rank:9
Score:0.54
Offset:1
Orientation:reverse strand
Alignment:GCCTGGAAAGTCACTG
-NNTGGAAANN-----
 A C T G A T G C A G T C A G C T C T A G C T A G T G C A C T G A C G T A T A C G G C A T G A T C G C T A A G T C C A G T A T C G
A C G T C G T A C T G A G A C T C T A G A C T G C T G A C T G A G C T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:10
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:GCCTGGAAAGTCACTG
----GGAAANCCCC--
 A C T G A T G C A G T C A G C T C T A G C T A G T G C A C T G A C G T A T A C G G C A T G A T C G C T A A G T C C A G T A T C G
A C G T A C G T A C G T A C G T A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T