Information for 7-GCCCAGAAACACT (Motif 15)

A C T G A G T C A G T C A G T C C G T A A C T G C G T A C G T A C G T A A G T C C G T A A G T C A C G T
Reverse Opposite:
C G T A A C T G A C G T A C T G A C G T A C G T A C G T A G T C A C G T A C T G A C T G A C T G A G T C
p-value:1e-8
log p-value:-1.915e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.45%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets27.2 +/- 9.0bp
Average Position of motif in Background32.8 +/- 16.2bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-GCCCAGAAACACT
TGCCCAGNHW----
 A C G T A C T G A G T C A G T C A G T C C G T A A C T G C G T A C G T A C G T A A G T C C G T A A G T C A C G T
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T A C G T A C G T

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.61
Offset:0
Orientation:forward strand
Alignment:GCCCAGAAACACT
SCCTAGCAACAG-
 A C T G A G T C A G T C A G T C C G T A A C T G C G T A C G T A C G T A A G T C C G T A A G T C A C G T
A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G A C G T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:3
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GCCCAGAAACACT
TGTTKCCTAGCAACM--
 A C G T A C G T A C G T A C G T A C T G A G T C A G T C A G T C C G T A A C T G C G T A C G T A C G T A A G T C C G T A A G T C A C G T
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C A C G T A C G T

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:4
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GCCCAGAAACACT
--CCAGGAACAG-
 A C T G A G T C A G T C A G T C C G T A A C T G C G T A C G T A C G T A A G T C C G T A A G T C A C G T
A C G T A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G A C G T

Foxq1/MA0040.1/Jaspar

Match Rank:5
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:GCCCAGAAACACT-
---AATAAACAATN
 A C T G A G T C A G T C A G T C C G T A A C T G C G T A C G T A C G T A A G T C C G T A A G T C A C G T A C G T
A C G T A C G T A C G T G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:6
Score:0.55
Offset:6
Orientation:forward strand
Alignment:GCCCAGAAACACT---
------AAGCACTTAA
 A C T G A G T C A G T C A G T C C G T A A C T G C G T A C G T A C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

Sox5/MA0087.1/Jaspar

Match Rank:7
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GCCCAGAAACACT
------NAACAAT
 A C T G A G T C A G T C A G T C C G T A A C T G C G T A C G T A C G T A A G T C C G T A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C G T A C T G A A G T C C G T A G T C A A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:8
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:GCCCAGAAACACT---
------MRSCACTYAA
 A C T G A G T C A G T C A G T C C G T A A C T G C G T A C G T A C G T A A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

STAT1/MA0137.3/Jaspar

Match Rank:9
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--GCCCAGAAACACT
TTTCCTGGAAA----
 A C G T A C G T A C T G A G T C A G T C A G T C C G T A A C T G C G T A C G T A C G T A A G T C C G T A A G T C A C G T
G A C T A C G T A G C T G T A C A G T C G A C T C T A G A C T G T G C A C T G A T G C A A C G T A C G T A C G T A C G T

FOXL1/MA0033.2/Jaspar

Match Rank:10
Score:0.53
Offset:4
Orientation:forward strand
Alignment:GCCCAGAAACACT
----GTAAACA--
 A C T G A G T C A G T C A G T C C G T A A C T G C G T A C G T A C G T A A G T C C G T A A G T C A C G T
A C G T A C G T A C G T A C G T C T A G G A C T T G C A G T C A T G C A A G T C G T C A A C G T A C G T