Information for 1-TGGGTGGCTGAGG (Motif 1)

A C G T A C T G A C T G A C T G A C G T C T A G A C T G A G T C A C G T A T C G C G T A A C T G A T C G
Reverse Opposite:
A T G C A G T C A C G T A T G C C G T A A C T G A G T C A G T C C G T A A G T C A G T C A G T C T C G A
p-value:1e-13
log p-value:-3.054e+01
Information Content per bp:1.905
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif1.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.3 +/- 17.5bp
Average Position of motif in Background28.4 +/- 12.5bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0054.1_Rfx3_1/Jaspar

Match Rank:1
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TGGGTGGCTGAGG------
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T C T A G A C T G A G T C A C G T A T C G C G T A A C T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

PB0055.1_Rfx4_1/Jaspar

Match Rank:2
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TGGGTGGCTGAGG--
NNCGTTGCTATGGNN
 A C G T A C T G A C T G A C T G A C G T C T A G A C T G A G T C A C G T A T C G C G T A A C T G A T C G A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:3
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----TGGGTGGCTGAGG
GTCATGCHTGRCTGS--
 A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T C T A G A C T G A G T C A C G T A T C G C G T A A C T G A T C G
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:4
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGGGTGGCTGAGG--
AAGGKGRCGCAGGCA
 A C G T A C T G A C T G A C T G A C G T C T A G A C T G A G T C A C G T A T C G C G T A A C T G A T C G A C G T A C G T
T G C A C G T A A C T G T C A G C A G T C A T G T C A G G A T C T A C G A G T C T G C A A C T G A C T G T G A C G T C A

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.56
Offset:0
Orientation:forward strand
Alignment:TGGGTGGCTGAGG
TGCGTGGGYG---
 A C G T A C T G A C T G A C T G A C G T C T A G A C T G A G T C A C G T A T C G C G T A A C T G A T C G
C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T A C G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:6
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TGGGTGGCTGAGG--
NCCGTTGCTANGNGN
 A C G T A C T G A C T G A C T G A C G T C T A G A C T G A G T C A C G T A T C G C G T A A C T G A T C G A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

POL010.1_DCE_S_III/Jaspar

Match Rank:7
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:TGGGTGGCTGAGG
-----NGCTN---
 A C G T A C T G A C T G A C T G A C G T C T A G A C T G A G T C A C G T A T C G C G T A A C T G A T C G
A C G T A C G T A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:8
Score:0.55
Offset:4
Orientation:reverse strand
Alignment:TGGGTGGCTGAGG--
----TGCCTGAGGCN
 A C G T A C T G A C T G A C T G A C G T C T A G A C T G A G T C A C G T A T C G C G T A A C T G A T C G A C G T A C G T
A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

RREB1/MA0073.1/Jaspar

Match Rank:9
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------TGGGTGGCTGAGG-
NGGGGGGGGGTGGTTTGGGG
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A C T G A C T G A C G T C T A G A C T G A G T C A C G T A T C G C G T A A C T G A T C G A C G T
A C G T A T C G C A T G A C T G C A T G A C T G A C T G A C T G A C T G A C T G A C G T A C T G C A T G A C G T A C G T A C G T A C T G A C T G A C T G A C T G

FOSL2/MA0478.1/Jaspar

Match Rank:10
Score:0.55
Offset:1
Orientation:forward strand
Alignment:TGGGTGGCTGAGG
-GGATGACTCAT-
 A C G T A C T G A C T G A C T G A C G T C T A G A C T G A G T C A C G T A T C G C G T A A C T G A T C G
A C G T A C T G T C A G C T G A A C G T A C T G T C G A A T G C A C G T G T A C C G T A A C G T A C G T