Information for 7-CTCTGTCCAYGGTKCT (Motif 24)

A G T C A C G T A G T C A C G T A C T G A G C T A G T C A G T C C G T A A G C T A C T G A C T G A C G T A C T G A G T C A C G T
Reverse Opposite:
C G T A A C T G G T A C C G T A A G T C A G T C C T G A C G A T A C T G A C T G C T G A A G T C C G T A A C T G G T C A A C T G
p-value:1e-5
log p-value:-1.340e+01
Information Content per bp:1.922
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.32%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets37.8 +/- 19.1bp
Average Position of motif in Background28.4 +/- 14.3bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST/MA0138.2/Jaspar

Match Rank:1
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--CTCTGTCCAYGGTKCT---
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A G T C A C G T A G T C A C G T A C T G A G C T A G T C A G T C C G T A A G C T A C T G A C T G A C G T A C T G A G T C A C G T A C G T A C G T A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:2
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--CTCTGTCCAYGGTKCT--
GGAGCTGTCCATGGTGCTGA
 A C G T A C G T A G T C A C G T A G T C A C G T A C T G A G C T A G T C A G T C C G T A A G C T A C T G A C T G A C G T A C T G A G T C A C G T A C G T A C G T
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:3
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CTCTGTCCAYGGTKCT
--CTGTTCCTGG----
 A G T C A C G T A G T C A C G T A C T G A G C T A G T C A G T C C G T A A G C T A C T G A C T G A C G T A C T G A G T C A C G T
A C G T A C G T T A G C C G A T A T C G A C G T A C G T A G T C A G T C G C A T C A T G A T C G A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CTCTGTCCAYGGTKCT
--CTGACCTTTG----
 A G T C A C G T A G T C A C G T A C T G A G C T A G T C A G T C C G T A A G C T A C T G A C T G A C G T A C T G A G T C A C G T
A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.51
Offset:1
Orientation:reverse strand
Alignment:CTCTGTCCAYGGTKCT
-GCTGTCAA-------
 A G T C A C G T A G T C A C G T A C T G A G C T A G T C A G T C C G T A A G C T A C T G A C T G A C G T A C T G A G T C A C G T
A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.50
Offset:5
Orientation:forward strand
Alignment:CTCTGTCCAYGGTKCT
-----NCCATTGTTC-
 A G T C A C G T A G T C A C G T A C T G A G C T A G T C A G T C C G T A A G C T A C T G A C T G A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C G A T C C G T A A C G T A C G T A C T G A C G T A G C T G A T C A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:7
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:CTCTGTCCAYGGTKCT
-CCTGTCAA-------
 A G T C A C G T A G T C A C G T A C T G A G C T A G T C A G T C C G T A A G C T A C T G A C T G A C G T A C T G A G T C A C G T
A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:8
Score:0.49
Offset:6
Orientation:forward strand
Alignment:CTCTGTCCAYGGTKCT
------CCATTGTTYB
 A G T C A C G T A G T C A C G T A C T G A G C T A G T C A G T C C G T A A G C T A C T G A C T G A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:9
Score:0.49
Offset:-1
Orientation:forward strand
Alignment:-CTCTGTCCAYGGTKCT
YCTTTGTTCC-------
 A C G T A G T C A C G T A G T C A C G T A C T G A G C T A G T C A G T C C G T A A G C T A C T G A C T G A C G T A C T G A G T C A C G T
A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A G T C A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Sox6/MA0515.1/Jaspar

Match Rank:10
Score:0.48
Offset:6
Orientation:forward strand
Alignment:CTCTGTCCAYGGTKCT
------CCATTGTTTT
 A G T C A C G T A G T C A C G T A C T G A G C T A G T C A G T C C G T A A G C T A C T G A C T G A C G T A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G T C A G T C C G T A A C G T A C G T A C T G A C G T A G C T G A C T A G C T