Information for 20-KWGAAWAKTGWKA (Motif 23)

A C T G C G T A A C T G C G T A C G T A C G A T C G T A A C T G A C G T A T C G C G A T A C T G C G T A
Reverse Opposite:
A C G T G T A C C G T A A T G C C G T A T G A C A C G T C G T A A C G T A C G T A G T C G C A T G T A C
p-value:1e-6
log p-value:-1.590e+01
Information Content per bp:1.816
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets61.5 +/- 23.2bp
Average Position of motif in Background35.7 +/- 21.2bp
Strand Bias (log2 ratio + to - strand density)2.8
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Arid5a/MA0602.1/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:forward strand
Alignment:KWGAAWAKTGWKA--
-CTAATATTGCTAAA
 A C T G C G T A A C T G C G T A C G T A C G A T C G T A A C T G A C G T A T C G C G A T A C T G C G T A A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

PB0002.1_Arid5a_1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:KWGAAWAKTGWKA--
-CTAATATTGCTAAA
 A C T G C G T A A C T G C G T A C G T A C G A T C G T A A C T G A C G T A T C G C G A T A C T G C G T A A C G T A C G T
A C G T T A G C G A C T C T G A C G T A C G A T C G T A C G A T A G C T C T A G T G A C C G A T C T G A C G T A G C T A

Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer

Match Rank:3
Score:0.61
Offset:4
Orientation:forward strand
Alignment:KWGAAWAKTGWKA-
----AAGGTGTKAA
 A C T G C G T A A C T G C G T A C G T A C G A T C G T A A C T G A C G T A T C G C G A T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T C T G A C T G A C A T G A T C G A G C T A T C G G A C T C A T G C T G A G T C A

PB0165.1_Sox11_2/Jaspar

Match Rank:4
Score:0.60
Offset:3
Orientation:forward strand
Alignment:KWGAAWAKTGWKA----
---AAAATTGTTATGAA
 A C T G C G T A A C T G C G T A C G T A C G A T C G T A A C T G A C G T A T C G C G A T A C T G C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C G T A C T G A C T G A C T G A A C G T G A C T T C A G C G A T G A C T G C T A C A G T T C A G C T G A C G T A

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:5
Score:0.59
Offset:5
Orientation:forward strand
Alignment:KWGAAWAKTGWKA--
-----AGGTGTGAAM
 A C T G C G T A A C T G C G T A C G T A C G A T C G T A A C T G A C G T A T C G C G A T A C T G C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C T A G C A T G A G C T A C T G C G A T A T C G C G T A G T C A G T C A

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:6
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:KWGAAWAKTGWKA-
--GWAAYHTGABMC
 A C T G C G T A A C T G C G T A C G T A C G A T C G T A A C T G A C G T A T C G C G A T A C T G C G T A A C G T
A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

PB0175.1_Sox4_2/Jaspar

Match Rank:7
Score:0.57
Offset:0
Orientation:forward strand
Alignment:KWGAAWAKTGWKA----
GGAAAAATTGTTAGGAA
 A C T G C G T A A C T G C G T A C G T A C G A T C G T A A C T G A C G T A T C G C G A T A C T G C G T A A C G T A C G T A C G T A C G T
T A C G T C A G G C T A C G T A C T G A C T G A C T G A A G C T C G A T T C A G C G A T G A C T C T G A T A C G C T A G C T G A C T G A

TBX21/MA0690.1/Jaspar

Match Rank:8
Score:0.56
Offset:4
Orientation:forward strand
Alignment:KWGAAWAKTGWKA-
----AAGGTGTGAA
 A C T G C G T A A C T G C G T A C G T A C G A T C G T A A C T G A C G T A T C G C G A T A C T G C G T A A C G T
A C G T A C G T A C G T A C G T C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A

Sox5/MA0087.1/Jaspar

Match Rank:9
Score:0.56
Offset:6
Orientation:forward strand
Alignment:KWGAAWAKTGWKA
------ATTGTTA
 A C T G C G T A A C T G C G T A C G T A C G A T C G T A A C T G A C G T A T C G C G A T A C T G C G T A
A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C G T A C G T C T A G A G C T G A C T C G A T

PB0146.1_Mafk_2/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:KWGAAWAKTGWKA--
GAAAAAATTGCAAGG
 A C T G C G T A A C T G C G T A C G T A C G A T C G T A A C T G A C G T A T C G C G A T A C T G C G T A A C G T A C G T
T C A G G T C A T C G A C T G A C T G A G C T A G C T A C A G T A G C T C A T G A G T C T G C A G T C A A T C G T C A G