Information for 15-GARATGGCGG (Motif 19)

T C A G G T C A T C A G T G C A A G C T T A C G T C A G T A G C C A T G C A T G
Reverse Opposite:
G T A C G T A C A T C G A G T C A T G C T C G A A C G T A G T C C A G T A G T C
p-value:1e-8
log p-value:-1.880e+01
Information Content per bp:1.571
Number of Target Sequences with motif36.0
Percentage of Target Sequences with motif3.88%
Number of Background Sequences with motif558.6
Percentage of Background Sequences with motif1.26%
Average Position of motif in Targets47.3 +/- 23.9bp
Average Position of motif in Background52.7 +/- 39.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY2/MA0748.1/Jaspar

Match Rank:1
Score:0.81
Offset:1
Orientation:reverse strand
Alignment:GARATGGCGG--
-TAATGGCGGNC
 T C A G G T C A T C A G T G C A A G C T T A C G T C A G T A G C C A T G C A T G A C G T A C G T
A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C

YY1(Zf)/Promoter/Homer

Match Rank:2
Score:0.76
Offset:-1
Orientation:forward strand
Alignment:-GARATGGCGG-
CAAGATGGCGGC
 A C G T T C A G G T C A T C A G T G C A A G C T T A C G T C A G T A G C C A T G C A T G A C G T
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C

PB0164.1_Smad3_2/Jaspar

Match Rank:3
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GARATGGCGG------
NAGANTGGCGGGGNGNA
 A C G T T C A G G T C A T C A G T G C A A G C T T A C G T C A G T A G C C A T G C A T G A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

YY1/MA0095.2/Jaspar

Match Rank:4
Score:0.73
Offset:-1
Orientation:forward strand
Alignment:-GARATGGCGG-
CAAGATGGCGGC
 A C G T T C A G G T C A T C A G T G C A A G C T T A C G T C A G T A G C C A T G C A T G A C G T
T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

SP2/MA0516.1/Jaspar

Match Rank:5
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--GARATGGCGG---
GGGNGGGGGCGGGGC
 A C G T A C G T T C A G G T C A T C A G T G C A A G C T T A C G T C A G T A G C C A T G C A T G A C G T A C G T A C G T
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

EGR1/MA0162.2/Jaspar

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GARATGGCGG---
GGCGGGGGCGGGGG
 A C G T T C A G G T C A T C A G T G C A A G C T T A C G T C A G T A G C C A T G C A T G A C G T A C G T A C G T
A C T G T A C G G T A C C T A G C A T G T C A G C T A G A C T G G A T C C T A G C A T G T C A G C T A G T A C G

PB0010.1_Egr1_1/Jaspar

Match Rank:7
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---GARATGGCGG-
ANTGCGGGGGCGGN
 A C G T A C G T A C G T T C A G G T C A T C A G T G C A A G C T T A C G T C A G T A G C C A T G C A T G A C G T
G T C A C T G A G C A T T C A G T G A C C A T G A C T G C T A G A T C G A C T G A G T C C T A G C A T G C T G A

PB0201.1_Zfp281_2/Jaspar

Match Rank:8
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-GARATGGCGG------
NNNATTGGGGGTNTCCT
 A C G T T C A G G T C A T C A G T G C A A G C T T A C G T C A G T A G C C A T G C A T G A C G T A C G T A C G T A C G T A C G T A C G T
A G T C G C T A G C T A G C T A C G A T C G A T A C T G A C T G A C T G C A T G A C T G A G C T G T A C G C A T G T A C G T A C G C A T

SP1/MA0079.3/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GARATGGCGG---
--GGGGGCGGGGC
 T C A G G T C A T C A G T G C A A G C T T A C G T C A G T A G C C A T G C A T G A C G T A C G T A C G T
A C G T A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GARATGGCGG----
--BTKGGCGGGAAA
 T C A G G T C A T C A G T G C A A G C T T A C G T C A G T A G C C A T G C A T G A C G T A C G T A C G T A C G T
A C G T A C G T A C T G A C G T C A T G A T C G A T C G T G A C A C T G A T C G A T C G T G C A C T G A C G T A