Information for 14-GCCCGCCTAT (Motif 18)

A C T G A G T C A G T C G T A C A C T G A G T C A G T C A C G T G T C A A G C T
Reverse Opposite:
T C G A C A G T G T C A A C T G A C T G G T A C A C T G A C T G A C T G A G T C
p-value:1e-8
log p-value:-1.895e+01
Information Content per bp:1.865
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.05%
Number of Background Sequences with motif167.1
Percentage of Background Sequences with motif0.38%
Average Position of motif in Targets43.0 +/- 28.9bp
Average Position of motif in Background48.7 +/- 29.0bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0164.1_Smad3_2/Jaspar

Match Rank:1
Score:0.71
Offset:-4
Orientation:forward strand
Alignment:----GCCCGCCTAT---
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C G T A C T G A G T C A G T C G T A C A C T G A G T C A G T C A C G T G T C A A G C T A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

SP2/MA0516.1/Jaspar

Match Rank:2
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-GCCCGCCTAT----
GCCCCGCCCCCTCCC
 A C G T A C T G A G T C A G T C G T A C A C T G A G T C A G T C A C G T G T C A A G C T A C G T A C G T A C G T A C G T
A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

PB0008.1_E2F2_1/Jaspar

Match Rank:3
Score:0.70
Offset:-3
Orientation:reverse strand
Alignment:---GCCCGCCTAT--
NTCGCGCGCCTTNNN
 A C G T A C G T A C G T A C T G A G T C A G T C G T A C A C T G A G T C A G T C A C G T G T C A A G C T A C G T A C G T
C G T A C G A T A T G C C T A G T A G C A T C G A T G C A C T G A T G C A T G C G A C T C G A T G C A T C G T A A G C T

POL006.1_BREu/Jaspar

Match Rank:4
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GCCCGCCTAT
AGCGCGCC---
 A C G T A C T G A G T C A G T C G T A C A C T G A G T C A G T C A C G T G T C A A G C T
T G C A T A C G T A G C T C A G T G A C A C T G A G T C A G T C A C G T A C G T A C G T

PB0180.1_Sp4_2/Jaspar

Match Rank:5
Score:0.69
Offset:-4
Orientation:reverse strand
Alignment:----GCCCGCCTAT-
NNGGCCACGCCTTTN
 A C G T A C G T A C G T A C G T A C T G A G T C A G T C G T A C A C T G A G T C A G T C A C G T G T C A A G C T A C G T
G T A C C A G T C T A G C T A G T G A C G A T C T G C A T G A C A C T G T G A C T A G C A G C T G C A T G C A T T C A G

PB0009.1_E2F3_1/Jaspar

Match Rank:6
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GCCCGCCTAT--
ANCGCGCGCCCTTNN
 A C G T A C G T A C G T A C T G A G T C A G T C G T A C A C T G A G T C A G T C A C G T G T C A A G C T A C G T A C G T
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T

GCM2/MA0767.1/Jaspar

Match Rank:7
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-GCCCGCCTAT
TACCCGCATN-
 A C G T A C T G A G T C A G T C G T A C A C T G A G T C A G T C A C G T G T C A A G C T
G A C T C T G A A G T C G T A C G T A C T A C G A G T C T C G A A G C T T G C A A C G T

E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer

Match Rank:8
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GCCCGCCTAT
TTTCCCGCCMAV
 A C G T A C G T A C T G A G T C A G T C G T A C A C T G A G T C A G T C A C G T G T C A A G C T
C G A T G A C T A C G T A T G C A T G C A G T C A C T G A T G C T A G C G T A C T G C A T G A C

E2F6/MA0471.1/Jaspar

Match Rank:9
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---GCCCGCCTAT
NCTTCCCGCCC--
 A C G T A C G T A C G T A C T G A G T C A G T C G T A C A C T G A G T C A G T C A C G T G T C A A G C T
A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C A C G T A C G T

SP1/MA0079.3/Jaspar

Match Rank:10
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GCCCGCCTAT
GCCCCGCCCCC
 A C G T A C T G A G T C A G T C G T A C A C T G A G T C A G T C A C G T G T C A A G C T
A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C