Information for 8-CGCCMTSGTGYSK (Motif 10)

A G T C A C T G A G T C A G T C G T C A A C G T A T G C A C T G A C G T A C T G G A C T T A C G A C T G
Reverse Opposite:
G T A C A T G C C T G A A G T C C G T A G T A C A T C G C G T A A C G T A C T G A C T G A G T C A C T G
p-value:1e-11
log p-value:-2.611e+01
Information Content per bp:1.839
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif7.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets64.7 +/- 19.8bp
Average Position of motif in Background53.4 +/- 29.9bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

YY1(Zf)/Promoter/Homer

Match Rank:1
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--CGCCMTSGTGYSK
GCCGCCATCTTG---
 A C G T A C G T A G T C A C T G A G T C A G T C G T C A A C G T A T G C A C T G A C G T A C T G G A C T T A C G A C T G
C A T G G A T C A T G C C T A G A G T C A G T C C G T A A C G T A T G C A G C T A C G T A T C G A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:2
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--CGCCMTSGTGYSK
GCNGCCATCTTG---
 A C G T A C G T A G T C A C T G A G T C A G T C G T C A A C G T A T G C A C T G A C G T A C T G G A C T T A C G A C T G
C A T G A G T C T G A C C A T G A G T C A G T C C T G A A C G T A G T C A G C T G A C T A C T G A C G T A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CGCCMTSGTGYSK
GTCCGCCATTA-----
 A C G T A C G T A C G T A G T C A C T G A G T C A G T C G T C A A C G T A T G C A C T G A C G T A C T G G A C T T A C G A C T G
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T A C G T A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-CGCCMTSGTGYSK-
NNNCCATTGTGTNAN
 A C G T A G T C A C T G A G T C A G T C G T C A A C G T A T G C A C T G A C G T A C T G G A C T T A C G A C T G A C G T
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G

PB0164.1_Smad3_2/Jaspar

Match Rank:5
Score:0.57
Offset:-7
Orientation:forward strand
Alignment:-------CGCCMTSGTGYSK
TACGCCCCGCCACTCTG---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C A G T C G T C A A C G T A T G C A C T G A C G T A C T G G A C T T A C G A C T G
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G A C G T A C G T A C G T

Sox2/MA0143.3/Jaspar

Match Rank:6
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CGCCMTSGTGYSK
--CCTTTGTT---
 A G T C A C T G A G T C A G T C G T C A A C G T A T G C A C T G A C G T A C T G G A C T T A C G A C T G
A C G T A C G T A G T C A G T C C G A T A C G T A C G T A C T G A C G T A G C T A C G T A C G T A C G T

PB0200.1_Zfp187_2/Jaspar

Match Rank:7
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-CGCCMTSGTGYSK--
GAGCCCTTGTCCCTAA
 A C G T A G T C A C T G A G T C A G T C G T C A A C G T A T G C A C T G A C G T A C T G G A C T T A C G A C T G A C G T A C G T
A C T G C T G A C T A G G T A C A G T C A G T C G A C T A G C T T C A G G A C T G A T C A G T C G T A C G A C T G C A T T C A G

PB0009.1_E2F3_1/Jaspar

Match Rank:8
Score:0.56
Offset:-6
Orientation:reverse strand
Alignment:------CGCCMTSGTGYSK
ANCGCGCGCCCTTNN----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C A C T G A G T C A G T C G T C A A C G T A T G C A C T G A C G T A C T G G A C T T A C G A C T G
C G T A C G A T T A G C C T A G T A G C A T C G A T G C A C T G A G T C A T G C G A T C C G A T G C A T C G T A A G C T A C G T A C G T A C G T A C G T

Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.55
Offset:2
Orientation:forward strand
Alignment:CGCCMTSGTGYSK
--CCATTGTTYB-
 A G T C A C T G A G T C A G T C G T C A A C G T A T G C A C T G A C G T A C T G G A C T T A C G A C T G
A C G T A C G T A T G C G A T C C G T A A G C T C A G T A T C G G C A T A G C T G A C T A C T G A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CGCCMTSGTGYSK
CCCCCTGCTGTG-
 A G T C A C T G A G T C A G T C G T C A A C G T A T G C A C T G A C G T A C T G G A C T T A C G A C T G
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T