Information for 2-TCCCAGTGGG (Motif 5)

A G C T A G T C A T G C G T A C C G T A A T C G C G A T A C T G A C T G A C T G
Reverse Opposite:
A G T C A G T C A G T C C G T A A T G C A C G T A C T G A T C G A C T G C T G A
p-value:1e-6
log p-value:-1.572e+01
Information Content per bp:1.878
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif11.48%
Number of Background Sequences with motif309.7
Percentage of Background Sequences with motif0.65%
Average Position of motif in Targets71.1 +/- 18.4bp
Average Position of motif in Background51.1 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TCCCAGTGGG
GTCCCCAGGGGA
 A C G T A C G T A G C T A G T C A T G C G T A C C G T A A T C G C G A T A C T G A C T G A C T G
C A T G A C G T A G T C G A T C G A T C G A T C G C T A C T A G C T A G C T A G T C A G T C G A

PB0114.1_Egr1_2/Jaspar

Match Rank:2
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TCCCAGTGGG-----
TGCGGAGTGGGACTGG
 A C G T A G C T A G T C A T G C G T A C C G T A A T C G C G A T A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C T G G A T C A C T G C T A G T C G A C T A G C A G T C T A G C A T G C A T G C G T A G A T C G C A T C T A G A C T G

PB0195.1_Zbtb3_2/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:reverse strand
Alignment:----TCCCAGTGGG--
NNNNTGCCAGTGATTG
 A C G T A C G T A C G T A C G T A G C T A G T C A T G C G T A C C G T A A T C G C G A T A C T G A C T G A C T G A C G T A C G T
G C T A G C A T C G A T G A T C G A C T T C A G T G A C T A G C C G T A A C T G A G C T C A T G C G T A A G C T C G A T T C A G

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TCCCAGTGGG
DCTCAGCAGG
 A G C T A G T C A T G C G T A C C G T A A T C G C G A T A C T G A C T G A C T G
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TCCCAGTGGG-----
DCHCAGCAGGRGGCC
 A G C T A G T C A T G C G T A C C G T A A T C G C G A T A C T G A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

PB0206.1_Zic2_2/Jaspar

Match Rank:6
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--TCCCAGTGGG---
CCACACAGCAGGAGA
 A C G T A C G T A G C T A G T C A T G C G T A C C G T A A T C G C G A T A C T G A C T G A C T G A C G T A C G T A C G T
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0102.1_Zic2_1/Jaspar

Match Rank:7
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TCCCAGTGGG--
ACCCCCCCGGGGGGN
 A C G T A C G T A C G T A G C T A G T C A T G C G T A C C G T A A T C G C G A T A C T G A C T G A C T G A C G T A C G T
T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

PB0205.1_Zic1_2/Jaspar

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--TCCCAGTGGG---
CCACACAGCAGGAGA
 A C G T A C G T A G C T A G T C A T G C G T A C C G T A A T C G C G A T A C T G A C T G A C T G A C G T A C G T A C G T
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0085.1_Tcfap2a_1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TCCCAGTGGG---
ATTCCCTGAGGGGAA
 A C G T A C G T A G C T A G T C A T G C G T A C C G T A A T C G C G A T A C T G A C T G A C T G A C G T A C G T A C G T
C G T A C G A T G A C T A T G C G T A C A G T C A G C T A T C G T C G A C T A G A C T G T A C G C T A G C G T A C T G A

PB0103.1_Zic3_1/Jaspar

Match Rank:10
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TCCCAGTGGG--
NCCCCCCCGGGGGGN
 A C G T A C G T A C G T A G C T A G T C A T G C G T A C C G T A A T C G C G A T A C T G A C T G A C T G A C G T A C G T
T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G