Information for 3-AYWTTGAMCYKGWKYM (Motif 2)

C G T A A G C T C G A T A C G T A C G T A C T G C G T A G T A C A G T C A G C T A C G T A C T G C G T A A C T G A G C T G T A C
Reverse Opposite:
C A G T C T G A G T A C C G A T A G T C G T C A C T G A A C T G A C T G A C G T A G T C C G T A C G T A C G T A C T G A A C G T
p-value:1e-9
log p-value:-2.184e+01
Information Content per bp:1.790
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif4.92%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets36.7 +/- 31.2bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ESRRB/MA0141.3/Jaspar

Match Rank:1
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:AYWTTGAMCYKGWKYM
--NATGACCTTGA---
 C G T A A G C T C G A T A C G T A C G T A C T G C G T A G T A C A G T C A G C T A C G T A C T G C G T A A C T G A G C T G T A C
A C G T A C G T C G A T C G T A G A C T C T A G T C G A T A G C A G T C A G C T C G A T A T C G C T G A A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:2
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:AYWTTGAMCYKGWKYM
----TGACCTTGAT--
 C G T A A G C T C G A T A C G T A C G T A C T G C G T A G T A C A G T C A G C T A C G T A C T G C G T A A C T G A G C T G T A C
A C G T A C G T A C G T A C G T A C G T A C T G C G T A A G T C A G T C A G C T G C A T A C T G C G T A G C A T A C G T A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:3
Score:0.67
Offset:-5
Orientation:reverse strand
Alignment:-----AYWTTGAMCYKGWKYM
ATTGGACTTTGACCCC-----
 A C G T A C G T A C G T A C G T A C G T C G T A A G C T C G A T A C G T A C G T A C T G C G T A G T A C A G T C A G C T A C G T A C T G C G T A A C T G A G C T G T A C
C T G A A G C T G A C T T C A G T C A G T G C A T G A C A G C T G A C T A G C T T C A G G T C A G T A C G A T C A G T C A G T C A C G T A C G T A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:4
Score:0.66
Offset:3
Orientation:reverse strand
Alignment:AYWTTGAMCYKGWKYM
---ATGACCTTGA---
 C G T A A G C T C G A T A C G T A C G T A C T G C G T A G T A C A G T C A G C T A C G T A C T G C G T A A C T G A G C T G T A C
A C G T A C G T A C G T C G T A G A C T T C A G G T C A T A G C G T A C A G C T G A C T A T C G C T G A A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.66
Offset:3
Orientation:forward strand
Alignment:AYWTTGAMCYKGWKYM
---NTGACCTTGA---
 C G T A A G C T C G A T A C G T A C G T A C T G C G T A G T A C A G T C A G C T A C G T A C T G C G T A A C T G A G C T G T A C
A C G T A C G T A C G T C A T G A G C T T A C G G T C A G T A C T A G C A G C T G A C T A T C G T C G A A C G T A C G T A C G T

PB0014.1_Esrra_1/Jaspar

Match Rank:6
Score:0.65
Offset:-1
Orientation:reverse strand
Alignment:-AYWTTGAMCYKGWKYM
NNNNATGACCTTGANTN
 A C G T C G T A A G C T C G A T A C G T A C G T A C T G C G T A G T A C A G T C A G C T A C G T A C T G C G T A A C T G A G C T G T A C
C A G T G T A C T C A G A G T C C G T A A G C T T C A G G C T A G A T C G T A C A G C T G A C T A T C G T C G A G T C A C A G T G T C A

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:7
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--AYWTTGAMCYKGWKYM
TGACCTTGACCT------
 A C G T A C G T C G T A A G C T C G A T A C G T A C G T A C T G C G T A G T A C A G T C A G C T A C G T A C T G C G T A A C T G A G C T G T A C
G A C T T A C G G C T A T G A C A G T C A G C T A C G T C T A G T C G A G T A C G T A C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:8
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:AYWTTGAMCYKGWKYM
----TGACCT------
 C G T A A G C T C G A T A C G T A C G T A C T G C G T A G T A C A G T C A G C T A C G T A C T G C G T A A C T G A G C T G T A C
A C G T A C G T A C G T A C G T A C G T C A T G G C T A G T A C G T A C G A C T A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:9
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:AYWTTGAMCYKGWKYM
----TGACCTTGAV--
 C G T A A G C T C G A T A C G T A C G T A C T G C G T A G T A C A G T C A G C T A C G T A C T G C G T A A C T G A G C T G T A C
A C G T A C G T A C G T A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:10
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AYWTTGAMCYKGWKYM
--BNTGDCCTTG----
 C G T A A G C T C G A T A C G T A C G T A C T G C G T A G T A C A G T C A G C T A C G T A C T G C G T A A C T G A G C T G T A C
A C G T A C G T A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T