Information for 9-GTCTGAAGCC (Motif 15)

A C T G G A C T A T G C A G C T A T C G G T C A T G C A C A T G A G T C G T A C
Reverse Opposite:
A C T G A C T G G T A C A C G T A C G T A T G C C T G A A T C G C T G A A G T C
p-value:1e-10
log p-value:-2.381e+01
Information Content per bp:1.841
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.10%
Number of Background Sequences with motif136.8
Percentage of Background Sequences with motif0.29%
Average Position of motif in Targets56.9 +/- 24.3bp
Average Position of motif in Background50.4 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL008.1_DCE_S_I/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:GTCTGAAGCC
---NGAAGC-
 A C T G G A C T A T G C A G C T A T C G G T C A T G C A C A T G A G T C G T A C
A C G T A C G T A C G T T A C G T A C G T G C A T C G A T A C G T G A C A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.64
Offset:1
Orientation:forward strand
Alignment:GTCTGAAGCC-
-ACTGAAACCA
 A C T G G A C T A T G C A G C T A T C G G T C A T G C A C A T G A G T C G T A C A C G T
A C G T G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GTCTGAAGCC
TWGTCTGV----
 A C G T A C G T A C T G G A C T A T G C A G C T A T C G G T C A T G C A C A T G A G T C G T A C
A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--GTCTGAAGCC
CTGTCTGG----
 A C G T A C G T A C T G G A C T A T G C A G C T A T C G G T C A T G C A C A T G A G T C G T A C
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GTCTGAAGCC-
TGTCTGDCACCT
 A C G T A C T G G A C T A T G C A G C T A T C G G T C A T G C A C A T G A G T C G T A C A C G T
G C A T A C T G C G A T A G T C A C G T T A C G C A T G A G T C C G T A T A G C G A T C G A C T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:6
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GTCTGAAGCC
VBSYGTCTGG----
 A C G T A C G T A C G T A C G T A C T G G A C T A T G C A G C T A T C G G T C A T G C A C A T G A G T C G T A C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T A C G T A C G T

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GTCTGAAGCC
AGCCTCAGGCA
 A C G T A C T G G A C T A T G C A G C T A T C G G T C A T G C A C A T G A G T C G T A C
G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A

TFAP2A/MA0003.3/Jaspar

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-GTCTGAAGCC
CGCCTCAGGCA
 A C G T A C T G G A C T A T G C A G C T A T C G G T C A T G C A C A T G A G T C G T A C
G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GTCTGAAGCC-
CTGTCTGTCACCT
 A C G T A C G T A C T G G A C T A T G C A G C T A T C G G T C A T G C A C A T G A G T C G T A C A C G T
T A G C G C A T T C A G A C G T A G T C A C G T T A C G C A G T A T G C G C T A T A G C G A T C G A C T

TBX20/MA0689.1/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---GTCTGAAGCC
TAGGTGTGAAG--
 A C G T A C G T A C G T A C T G G A C T A T G C A G C T A T C G G T C A T G C A C A T G A G T C G T A C
C G A T C T G A T C A G A C T G A C G T A C T G C A G T C A T G C G T A C G T A T C A G A C G T A C G T