Motif Name	Consensus	P-value	Log P-value	q-value (Benjamini)	# of Target Sequences with Motif(of 905)	% of Target Sequences with Motif	# of Background Sequences with Motif(of 44266)	% of Background Sequences with Motif
NRF(NRF)/Promoter/Homer	STGCGCATGCGC	1e-44	-1.017e+02	0.0000	151.0	16.69%	1930.0	4.36%
NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer	CTGCGCATGCGC	1e-40	-9.355e+01	0.0000	149.0	16.46%	2019.5	4.56%
Atf3(bZIP)/GBM-ATF3-ChIP-Seq(GSE33912)/Homer	DATGASTCATHN	1e-19	-4.585e+01	0.0000	52.0	5.75%	507.8	1.15%
BATF(bZIP)/Th17-BATF-ChIP-Seq(GSE39756)/Homer	DATGASTCAT	1e-16	-3.738e+01	0.0000	47.0	5.19%	512.3	1.16%
Fra1(bZIP)/BT549-Fra1-ChIP-Seq(GSE46166)/Homer	NNATGASTCATH	1e-16	-3.708e+01	0.0000	42.0	4.64%	412.5	0.93%
JunB(bZIP)/DendriticCells-Junb-ChIP-Seq(GSE36099)/Homer	RATGASTCAT	1e-15	-3.592e+01	0.0000	43.0	4.75%	447.2	1.01%
AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	VTGACTCATC	1e-15	-3.589e+01	0.0000	51.0	5.64%	623.3	1.41%
Fosl2(bZIP)/3T3L1-Fosl2-ChIP-Seq(GSE56872)/Homer	NATGASTCABNN	1e-14	-3.302e+01	0.0000	33.0	3.65%	284.2	0.64%
Fra2(bZIP)/Striatum-Fra2-ChIP-Seq(GSE43429)/Homer	GGATGACTCATC	1e-14	-3.262e+01	0.0000	38.0	4.20%	386.6	0.87%
KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer	NRGCCCCRCCCHBNN	1e-8	-1.997e+01	0.0000	89.0	9.83%	2216.6	5.01%
Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer	GCCACACCCA	1e-8	-1.955e+01	0.0000	59.0	6.52%	1229.5	2.78%
Jun-AP1(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	GATGASTCATCN	1e-8	-1.908e+01	0.0000	21.0	2.32%	209.8	0.47%
KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer	DGGGYGKGGC	1e-7	-1.776e+01	0.0000	184.0	20.33%	6035.8	13.64%
KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer	GGGGGTGTGTCC	1e-7	-1.722e+01	0.0000	67.0	7.40%	1581.0	3.57%
Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer	GCCACRCCCACY	1e-7	-1.669e+01	0.0000	67.0	7.40%	1604.1	3.63%
KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer	MKGGGYGTGGCC	1e-7	-1.638e+01	0.0000	158.0	17.46%	5083.1	11.49%
EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer	NWGGGTGTGGCY	1e-6	-1.534e+01	0.0000	25.0	2.76%	359.0	0.81%
Sp1(Zf)/Promoter/Homer	GGCCCCGCCCCC	1e-6	-1.515e+01	0.0000	85.0	9.39%	2322.5	5.25%
Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer	RGKGGGCGGAGC	1e-6	-1.492e+01	0.0000	158.0	17.46%	5205.1	11.77%
KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer	RGKGGGCGKGGC	1e-5	-1.252e+01	0.0001	221.0	24.42%	8133.7	18.38%
GFY(?)/Promoter/Homer	ACTACAATTCCC	1e-5	-1.215e+01	0.0001	16.0	1.77%	198.1	0.45%
NFY(CCAAT)/Promoter/Homer	RGCCAATSRG	1e-4	-1.130e+01	0.0002	55.0	6.08%	1444.1	3.26%
Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer	TGCTGAGTCA	1e-4	-1.126e+01	0.0002	16.0	1.77%	213.8	0.48%
CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	AYAGTGCCMYCTRGTGGCCA	1e-4	-1.060e+01	0.0004	21.0	2.32%	358.2	0.81%
Ronin(THAP)/ES-Thap11-ChIP-Seq(GSE51522)/Homer	RACTACAACTCCCAGVAKGC	1e-4	-1.014e+01	0.0006	13.0	1.44%	161.2	0.36%
Maz(Zf)/HepG2-Maz-ChIP-Seq(GSE31477)/Homer	GGGGGGGG	1e-4	-9.788e+00	0.0008	177.0	19.56%	6537.8	14.78%
GFY-Staf(?,Zf)/Promoter/Homer	RACTACAATTCCCAGAAKGC	1e-3	-8.996e+00	0.0017	14.0	1.55%	206.8	0.47%
GABPA(ETS)/Jurkat-GABPa-ChIP-Seq(GSE17954)/Homer	RACCGGAAGT	1e-3	-8.920e+00	0.0017	74.0	8.18%	2315.8	5.23%
Fli1(ETS)/CD8-FLI-ChIP-Seq(GSE20898)/Homer	NRYTTCCGGH	1e-3	-8.579e+00	0.0024	96.0	10.61%	3231.5	7.30%
Atf2(bZIP)/3T3L1-Atf2-ChIP-Seq(GSE56872)/Homer	NRRTGACGTCAT	1e-3	-8.530e+00	0.0024	23.0	2.54%	478.1	1.08%
Atf7(bZIP)/3T3L1-Atf7-ChIP-Seq(GSE56872)/Homer	NGRTGACGTCAY	1e-3	-8.458e+00	0.0025	28.0	3.09%	642.9	1.45%
ETV1(ETS)/GIST48-ETV1-ChIP-Seq(GSE22441)/Homer	AACCGGAAGT	1e-3	-7.770e+00	0.0048	97.0	10.72%	3352.7	7.58%
ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer	ACAGGAAGTG	1e-3	-7.634e+00	0.0053	97.0	10.72%	3366.1	7.61%
EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer	VACAGGAAAT	1e-3	-7.532e+00	0.0057	45.0	4.97%	1295.3	2.93%
Atf1(bZIP)/K562-ATF1-ChIP-Seq(GSE31477)/Homer	GATGACGTCA	1e-2	-6.809e+00	0.0115	34.0	3.76%	931.2	2.10%
Elk4(ETS)/Hela-Elk4-ChIP-Seq(GSE31477)/Homer	NRYTTCCGGY	1e-2	-6.715e+00	0.0123	64.0	7.07%	2099.4	4.75%
p63(p53)/Keratinocyte-p63-ChIP-Seq(GSE17611)/Homer	NNDRCATGYCYNRRCATGYH	1e-2	-6.559e+00	0.0139	25.0	2.76%	623.9	1.41%
TEAD(TEA)/Fibroblast-PU.1-ChIP-Seq(Unpublished)/Homer	YCWGGAATGY	1e-2	-6.349e+00	0.0168	25.0	2.76%	633.2	1.43%
Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer	TGTCANYT	1e-2	-5.954e+00	0.0242	124.0	13.70%	4726.9	10.68%
BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer	CNNBRGCGCCCCCTGSTGGC	1e-2	-5.916e+00	0.0245	34.0	3.76%	985.3	2.23%
ETS1(ETS)/Jurkat-ETS1-ChIP-Seq(GSE17954)/Homer	ACAGGAAGTG	1e-2	-5.810e+00	0.0266	71.0	7.85%	2473.2	5.59%
NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer	CYTGGCABNSTGCCAR	1e-2	-5.799e+00	0.0266	31.0	3.43%	880.2	1.99%
ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer	ATTTCCCAGVAKSCY	1e-2	-5.583e+00	0.0318	27.0	2.98%	745.7	1.69%
NF-E2(bZIP)/K562-NFE2-ChIP-Seq(GSE31477)/Homer	GATGACTCAGCA	1e-2	-5.440e+00	0.0359	5.0	0.55%	51.3	0.12%
SPDEF(ETS)/VCaP-SPDEF-ChIP-Seq(SRA014231)/Homer	ASWTCCTGBT	1e-2	-5.397e+00	0.0366	57.0	6.30%	1936.1	4.38%
Ets1-distal(ETS)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	MACAGGAAGT	1e-2	-5.384e+00	0.0366	16.0	1.77%	368.0	0.83%
Elk1(ETS)/Hela-Elk1-ChIP-Seq(GSE31477)/Homer	HACTTCCGGY	1e-2	-5.373e+00	0.0366	63.0	6.96%	2186.6	4.94%
BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer	GNCACGTG	1e-2	-5.079e+00	0.0472	89.0	9.83%	3323.5	7.51%
Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer	RAACAATGGN	1e-1	-4.557e+00	0.0780	31.0	3.43%	964.8	2.18%
c-Jun-CRE(bZIP)/K562-cJun-ChIP-Seq(GSE31477)/Homer	ATGACGTCATCY	1e-1	-4.556e+00	0.0780	15.0	1.66%	369.3	0.83%
Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer	NGCGTGGGCGGR	1e-1	-4.435e+00	0.0846	29.0	3.20%	895.4	2.02%
RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer	SAAACCACAG	1e-1	-4.422e+00	0.0846	30.0	3.31%	935.8	2.12%
Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer	MAATCACTGC	1e-1	-4.372e+00	0.0867	24.0	2.65%	707.1	1.60%
Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer	YCATYAATCA	1e-1	-4.221e+00	0.0990	19.0	2.10%	529.8	1.20%
ELF1(ETS)/Jurkat-ELF1-ChIP-Seq(SRA014231)/Homer	AVCCGGAAGT	1e-1	-4.175e+00	0.1018	53.0	5.86%	1897.3	4.29%
ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer	AGGCCTAG	1e-1	-4.026e+00	0.1160	191.0	21.10%	8101.0	18.31%
MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer	RTCATGTGAC	1e-1	-4.002e+00	0.1167	44.0	4.86%	1539.2	3.48%
Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer	BCCATTGTTC	1e-1	-3.996e+00	0.1167	28.0	3.09%	889.4	2.01%
E2F(E2F)/Hela-CellCycle-Expression/Homer	TTSGCGCGAAAA	1e-1	-3.809e+00	0.1367	11.0	1.22%	264.9	0.60%
ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer	WDNCTGGGCA	1e-1	-3.799e+00	0.1367	85.0	9.39%	3332.4	7.53%
Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer	YCTTTGTTCC	1e-1	-3.796e+00	0.1367	28.0	3.09%	905.5	2.05%
GRHL2(CP2)/HBE-GRHL2-ChIP-Seq(GSE46194)/Homer	AAACYKGTTWDACMRGTTTB	1e-1	-3.709e+00	0.1439	12.0	1.33%	303.6	0.69%
STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer	TTCCKNAGAA	1e-1	-3.526e+00	0.1699	16.0	1.77%	458.3	1.04%
CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer	NGYCATAAAWCH	1e-1	-3.521e+00	0.1699	17.0	1.88%	496.2	1.12%
ELF3(ETS)/PDAC-ELF3-ChIP-Seq(GSE64557)/Homer	ANCAGGAAGT	1e-1	-3.468e+00	0.1746	32.0	3.54%	1096.3	2.48%
Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer	CCATTGTTNY	1e-1	-3.421e+00	0.1802	44.0	4.86%	1603.2	3.62%
Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer	AGGVNCCTTTGT	1e-1	-3.372e+00	0.1864	29.0	3.20%	982.7	2.22%
TEAD2(TEA)/Py2T-Tead2-ChIP-Seq(GSE55709)/Homer	CCWGGAATGY	1e-1	-3.269e+00	0.2037	20.0	2.21%	629.6	1.42%
Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer	SCCTAGCAACAG	1e-1	-3.252e+00	0.2041	18.0	1.99%	552.0	1.25%
EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer	ATTTCCTGTN	1e-1	-3.169e+00	0.2187	26.0	2.87%	878.5	1.99%
NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer	GGAAATTCCC	1e-1	-3.126e+00	0.2250	4.0	0.44%	64.2	0.15%
HIF-1b(HLH)/T47D-HIF1b-ChIP-Seq(GSE59937)/Homer	RTACGTGC	1e-1	-3.090e+00	0.2302	86.0	9.50%	3497.0	7.90%
Tcfcp2l1(CP2)/mES-Tcfcp2l1-ChIP-Seq(GSE11431)/Homer	NRAACCRGTTYRAACCRGYT	1e-1	-3.084e+00	0.2302	9.0	0.99%	226.4	0.51%
NFAT:AP1(RHD,bZIP)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	SARTGGAAAAWRTGAGTCAB	1e-1	-3.011e+00	0.2423	5.0	0.55%	96.4	0.22%
Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer	CCWTTGTYYB	1e-1	-3.010e+00	0.2423	49.0	5.41%	1870.2	4.23%
STAT4(Stat)/CD4-Stat4-ChIP-Seq(GSE22104)/Homer	NYTTCCWGGAAR	1e-1	-2.966e+00	0.2467	31.0	3.43%	1105.3	2.50%
Bach1(bZIP)/K562-Bach1-ChIP-Seq(GSE31477)/Homer	AWWNTGCTGAGTCAT	1e-1	-2.936e+00	0.2509	3.0	0.33%	41.7	0.09%
Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer	CCWTTGTY	1e-1	-2.905e+00	0.2554	48.0	5.30%	1841.3	4.16%
Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer	VGCTGWCAVB	1e-1	-2.902e+00	0.2554	68.0	7.51%	2724.8	6.16%
Myf5(bHLH)/GM-Myf5-ChIP-Seq(GSE24852)/Homer	BAACAGCTGT	1e-1	-2.884e+00	0.2554	52.0	5.75%	2019.6	4.56%
ETS(ETS)/Promoter/Homer	AACCGGAAGT	1e-1	-2.875e+00	0.2554	32.0	3.54%	1157.9	2.62%
ZNF528(Zf)/HEK293-ZNF528.GFP-ChIP-Seq(GSE58341)/Homer	AGAAATGACTTCCCT	1e-1	-2.821e+00	0.2642	1.0	0.11%	3.4	0.01%
Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer	TGACCTTTNCNT	1e-1	-2.817e+00	0.2642	6.0	0.66%	134.2	0.30%
HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer	GGCCATAAATCA	1e-1	-2.778e+00	0.2694	12.0	1.33%	352.4	0.80%
Sox17(HMG)/Endoderm-Sox17-ChIP-Seq(GSE61475)/Homer	CCATTGTTYB	1e-1	-2.730e+00	0.2793	21.0	2.32%	713.2	1.61%
ZNF467(Zf)/HEK293-ZNF467.GFP-ChIP-Seq(GSE58341)/Homer	TGGGGAAGGGCM	1e-1	-2.701e+00	0.2841	63.0	6.96%	2535.1	5.73%
Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer	HTGCTGAGTCAT	1e-1	-2.664e+00	0.2915	3.0	0.33%	46.0	0.10%
Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)	NNAYTTCCTGHN	1e-1	-2.637e+00	0.2961	50.0	5.52%	1968.7	4.45%
TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer	GAGGTCAAAGGTCA	1e-1	-2.498e+00	0.3364	6.0	0.66%	146.6	0.33%
Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer	TGCGTGGGYG	1e-1	-2.489e+00	0.3364	73.0	8.07%	3024.1	6.84%
STAT6(Stat)/CD4-Stat6-ChIP-Seq(GSE22104)/Homer	ABTTCYYRRGAA	1e-1	-2.486e+00	0.3364	13.0	1.44%	410.5	0.93%
AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer	TGGCAGTTGG	1e-1	-2.480e+00	0.3364	63.0	6.96%	2574.5	5.82%
LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer	RGGTTACTANAGGTCA	1e-1	-2.472e+00	0.3364	3.0	0.33%	50.5	0.11%
p73(p53)/Trachea-p73-ChIP-Seq(PRJNA310161)/Homer	NRRRCAWGTCCDGRCATGYY	1e-1	-2.472e+00	0.3364	3.0	0.33%	50.7	0.11%
Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer	GGTGYTGACAGS	1e-1	-2.466e+00	0.3364	11.0	1.22%	333.2	0.75%
GFX(?)/Promoter/Homer	ATTCTCGCGAGA	1e-1	-2.383e+00	0.3499	3.0	0.33%	52.4	0.12%
NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer	WGGGGATTTCCC	1e-1	-2.381e+00	0.3499	21.0	2.32%	746.1	1.69%
Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer	TBGCACGCAA	1e-1	-2.368e+00	0.3499	53.0	5.86%	2145.9	4.85%
Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	HTTTCCCASG	1e-1	-2.366e+00	0.3499	55.0	6.08%	2235.6	5.05%
FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer	WAAGTAAACA	1e-1	-2.343e+00	0.3499	16.0	1.77%	542.1	1.23%
Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer	TGTTKCCTAGCAACM	1e-1	-2.318e+00	0.3548	62.0	6.85%	2559.9	5.79%
AP-2gamma(AP2)/MCF7-TFAP2C-ChIP-Seq(GSE21234)/Homer	SCCTSAGGSCAW	1e0	-2.302e+00	0.3572	104.0	11.49%	4487.4	10.14%
MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer	GGCVGTTR	1e0	-2.298e+00	0.3572	78.0	8.62%	3291.7	7.44%
ELF5(ETS)/T47D-ELF5-ChIP-Seq(GSE30407)/Homer	ACVAGGAAGT	1e0	-2.191e+00	0.3912	33.0	3.65%	1285.7	2.91%
Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer	YTGWCADY	1e0	-2.180e+00	0.3918	93.0	10.28%	4008.3	9.06%
PAX5(Paired,Homeobox),condensed/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GTCACGCTCSCTGM	1e0	-2.139e+00	0.4044	9.0	0.99%	276.8	0.63%
Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer	CTTCCGGGAA	1e0	-2.115e+00	0.4102	25.0	2.76%	946.7	2.14%
HRE(HSF)/HepG2-HSF1-ChIP-Seq(GSE31477)/Homer	BSTTCTRGAABVTTCYAGAA	1e0	-2.084e+00	0.4193	7.0	0.77%	202.8	0.46%
Oct6(POU,Homeobox)/NPC-Pou3f1-ChIP-Seq(GSE35496)/Homer	WATGCAAATGAG	1e0	-2.075e+00	0.4194	8.0	0.88%	241.1	0.54%
CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer	TGCAGTTCCMVNWRTGGCCA	1e0	-2.068e+00	0.4194	2.0	0.22%	30.3	0.07%
GATA(Zf),IR3/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NNNNNBAGATAWYATCTVHN	1e0	-2.068e+00	0.4194	3.0	0.33%	61.0	0.14%
ZNF264(Zf)/HEK293-ZNF264.GFP-ChIP-Seq(GSE58341)/Homer	RGGGCACTAACY	1e0	-2.059e+00	0.4194	38.0	4.20%	1526.6	3.45%
MafB(bZIP)/BMM-Mafb-ChIP-Seq(GSE75722)/Homer	WNTGCTGASTCAGCANWTTY	1e0	-2.058e+00	0.4194	12.0	1.33%	402.5	0.91%
CEBP(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	ATTGCGCAAC	1e0	-2.039e+00	0.4194	14.0	1.55%	486.9	1.10%
FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WAAGTAAACA	1e0	-2.028e+00	0.4194	19.0	2.10%	698.9	1.58%
Stat3+il21(Stat)/CD4-Stat3-ChIP-Seq(GSE19198)/Homer	SVYTTCCNGGAARB	1e0	-1.977e+00	0.4344	29.0	3.20%	1139.7	2.58%
USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer	SGTCACGTGR	1e0	-1.953e+00	0.4414	31.0	3.43%	1231.6	2.78%
DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer	TWGHWACAWTGTWDC	1e0	-1.941e+00	0.4427	4.0	0.44%	98.0	0.22%
JunD(bZIP)/K562-JunD-ChIP-Seq/Homer	ATGACGTCATCN	1e0	-1.916e+00	0.4502	6.0	0.66%	173.4	0.39%
STAT1(Stat)/HelaS3-STAT1-ChIP-Seq(GSE12782)/Homer	NATTTCCNGGAAAT	1e0	-1.916e+00	0.4502	9.0	0.99%	291.1	0.66%
p53(p53)/Saos-p53-ChIP-Seq(GSE15780)/Homer	RRCATGYCYRGRCATGYYYN	1e0	-1.916e+00	0.4502	4.0	0.44%	99.2	0.22%
p53(p53)/Saos-p53-ChIP-Seq/Homer	RRCATGYCYRGRCATGYYYN	1e0	-1.916e+00	0.4502	4.0	0.44%	99.2	0.22%
Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer	SCTGTCAVTCAV	1e0	-1.896e+00	0.4502	11.0	1.22%	374.1	0.85%
PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer	ACCRTGACTAATTNN	1e0	-1.890e+00	0.4502	4.0	0.44%	100.1	0.23%
CRE(bZIP)/Promoter/Homer	CSGTGACGTCAC	1e0	-1.875e+00	0.4502	19.0	2.10%	715.0	1.62%
ZBTB33(Zf)/GM12878-ZBTB33-ChIP-Seq(GSE32465)/Homer	GGVTCTCGCGAGAAC	1e0	-1.874e+00	0.4502	9.0	0.99%	294.1	0.66%
MafK(bZIP)/C2C12-MafK-ChIP-Seq(GSE36030)/Homer	GCTGASTCAGCA	1e0	-1.860e+00	0.4502	9.0	0.99%	295.4	0.67%
Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer	GTCACGTGGT	1e0	-1.855e+00	0.4502	17.0	1.88%	631.9	1.43%
Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer	NNTGTGGATTSS	1e0	-1.854e+00	0.4502	13.0	1.44%	461.7	1.04%
NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer	NVCACGTG	1e0	-1.841e+00	0.4502	68.0	7.51%	2934.7	6.63%
PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer	AGAGGAAGTG	1e0	-1.798e+00	0.4601	19.0	2.10%	724.7	1.64%
EHF(ETS)/LoVo-EHF-ChIP-Seq(GSE49402)/Homer	AVCAGGAAGT	1e0	-1.793e+00	0.4601	54.0	5.97%	2300.3	5.20%
TFE3(bHLH)/MEF-TFE3-ChIP-Seq(GSE75757)/Homer	GTCACGTGACYV	1e0	-1.773e+00	0.4650	6.0	0.66%	181.9	0.41%
FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer	TRTTTACTTW	1e0	-1.772e+00	0.4650	16.0	1.77%	597.6	1.35%
Ap4(bHLH)/AML-Tfap4-ChIP-Seq(GSE45738)/Homer	NAHCAGCTGD	1e0	-1.770e+00	0.4650	79.0	8.73%	3462.6	7.83%
Tbx5(T-box)/HL1-Tbx5.biotin-ChIP-Seq(GSE21529)/Homer	AGGTGTCA	1e0	-1.752e+00	0.4650	141.0	15.58%	6383.7	14.43%
E2F3(E2F)/MEF-E2F3-ChIP-Seq(GSE71376)/Homer	BTKGGCGGGAAA	1e0	-1.728e+00	0.4720	82.0	9.06%	3613.8	8.17%
Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer	SCTGTCAMTCAN	1e0	-1.721e+00	0.4720	10.0	1.10%	347.3	0.78%
Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer	RTCACSCCAY	1e0	-1.689e+00	0.4835	9.0	0.99%	308.8	0.70%
IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer	GAAASYGAAASY	1e0	-1.637e+00	0.5058	4.0	0.44%	111.5	0.25%
RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer	NWAACCACADNN	1e0	-1.629e+00	0.5063	22.0	2.43%	878.0	1.98%
E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer	DNRCAGCTGY	1e0	-1.606e+00	0.5143	119.0	13.15%	5391.2	12.19%
E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer	GGCGGGAARN	1e0	-1.601e+00	0.5143	73.0	8.07%	3227.7	7.30%
TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer	CCWGGAATGY	1e0	-1.517e+00	0.5547	27.0	2.98%	1120.6	2.53%
Gata1(Zf)/K562-GATA1-ChIP-Seq(GSE18829)/Homer	SAGATAAGRV	1e0	-1.488e+00	0.5666	9.0	0.99%	325.7	0.74%
Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	CTGGCAGSCTGCCA	1e0	-1.479e+00	0.5684	21.0	2.32%	855.0	1.93%
Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer	VNRVCAGCTGGY	1e0	-1.474e+00	0.5684	64.0	7.07%	2840.2	6.42%
Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer	VCAGCTGYTG	1e0	-1.465e+00	0.5684	79.0	8.73%	3547.5	8.02%
STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer	RTTTCTNAGAAA	1e0	-1.455e+00	0.5700	9.0	0.99%	328.0	0.74%
E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer	VDTTTCCCGCCA	1e0	-1.441e+00	0.5745	17.0	1.88%	681.1	1.54%
CEBP:CEBP(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	NTNATGCAAYMNNHTGMAAY	1e0	-1.441e+00	0.5745	3.0	0.33%	82.9	0.19%
IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer	AGTTTCAKTTTC	1e0	-1.431e+00	0.5745	7.0	0.77%	245.2	0.55%
NF1-halfsite(CTF)/LNCaP-NF1-ChIP-Seq(Unpublished)/Homer	YTGCCAAG	1e0	-1.423e+00	0.5745	97.0	10.72%	4411.5	9.97%
Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer	RCCATMTGTT	1e0	-1.409e+00	0.5776	72.0	7.96%	3234.2	7.31%
YY1(Zf)/Promoter/Homer	CAAGATGGCGGC	1e0	-1.402e+00	0.5781	9.0	0.99%	333.5	0.75%
ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer	AGGCCTRG	1e0	-1.395e+00	0.5784	98.0	10.83%	4468.8	10.10%
GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer	RGGATTAR	1e0	-1.391e+00	0.5784	16.0	1.77%	643.2	1.45%
Lhx3(Homeobox)/Neuron-Lhx3-ChIP-Seq(GSE31456)/Homer	ADBTAATTAR	1e0	-1.389e+00	0.5784	24.0	2.65%	1005.7	2.27%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	RGGTCADNNAGAGGTCAV	1e0	-1.386e+00	0.5784	2.0	0.22%	47.2	0.11%
DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer	YDGHTACAWTGTADC	1e0	-1.374e+00	0.5784	3.0	0.33%	85.7	0.19%
NPAS2(bHLH)/Liver-NPAS2-ChIP-Seq(GSE39860)/Homer	KCCACGTGAC	1e0	-1.364e+00	0.5784	53.0	5.86%	2354.1	5.32%
Zfp281(Zf)/ES-Zfp281-ChIP-Seq(GSE81042)/Homer	CCCCTCCCCCAC	1e0	-1.349e+00	0.5830	14.0	1.55%	559.6	1.26%
Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer	NNNCTTTCCAGGAAA	1e0	-1.334e+00	0.5883	38.0	4.20%	1661.7	3.76%
Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer	CTGTTTAC	1e0	-1.333e+00	0.5883	55.0	6.08%	2456.5	5.55%
Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer	GCTATTTTTAGC	1e0	-1.312e+00	0.5942	3.0	0.33%	88.5	0.20%
CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer	DRTGTTGCAA	1e0	-1.311e+00	0.5942	16.0	1.77%	654.8	1.48%
MyoG(bHLH)/C2C12-MyoG-ChIP-Seq(GSE36024)/Homer	AACAGCTG	1e0	-1.271e+00	0.6116	74.0	8.18%	3371.8	7.62%
Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer	VBSYGTCTGG	1e0	-1.269e+00	0.6116	87.0	9.61%	3989.7	9.02%
ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer	AGTTTCASTTTC	1e0	-1.246e+00	0.6196	2.0	0.22%	52.6	0.12%
Lhx2(Homeobox)/HFSC-Lhx2-ChIP-Seq(GSE48068)/Homer	TAATTAGN	1e0	-1.243e+00	0.6196	14.0	1.55%	573.5	1.30%
IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer	ACTGAAACCA	1e0	-1.237e+00	0.6196	10.0	1.10%	394.9	0.89%
RBPJ:Ebox(?,bHLH)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer	GGGRAARRGRMCAGMTG	1e0	-1.221e+00	0.6241	14.0	1.55%	576.8	1.30%
p53(p53)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	ACATGCCCGGGCAT	1e0	-1.220e+00	0.6241	2.0	0.22%	53.8	0.12%
Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer	NAACAGCTGG	1e0	-1.199e+00	0.6305	63.0	6.96%	2872.4	6.49%
Gata6(Zf)/HUG1N-GATA6-ChIP-Seq(GSE51936)/Homer	YCTTATCTBN	1e0	-1.194e+00	0.6305	12.0	1.33%	489.8	1.11%
Lhx1(Homeobox)/EmbryoCarcinoma-Lhx1-ChIP-Seq(GSE70957)/Homer	NNYTAATTAR	1e0	-1.178e+00	0.6365	14.0	1.55%	583.0	1.32%
OCT4-SOX2-TCF-NANOG(POU,Homeobox,HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAACAATG	1e0	-1.171e+00	0.6379	2.0	0.22%	55.4	0.13%
Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer	GCTATTTTTGGM	1e0	-1.169e+00	0.6379	11.0	1.22%	447.1	1.01%
Foxo3(Forkhead)/U2OS-Foxo3-ChIP-Seq(E-MTAB-2701)/Homer	DGTAAACA	1e0	-1.161e+00	0.6379	11.0	1.22%	448.8	1.01%
ZNF382(Zf)/HEK293-ZNF382.GFP-ChIP-Seq(GSE58341)/Homer	GNCTGTASTRNTGBCTCHTT	1e0	-1.133e+00	0.6514	1.0	0.11%	19.8	0.04%
E2A(bHLH),near_PU.1/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	NVCACCTGBN	1e0	-1.122e+00	0.6547	99.0	10.94%	4617.3	10.44%
Gata2(Zf)/K562-GATA2-ChIP-Seq(GSE18829)/Homer	BBCTTATCTS	1e0	-1.082e+00	0.6775	9.0	0.99%	367.6	0.83%
NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer	ACCATCTGTT	1e0	-1.061e+00	0.6887	68.0	7.51%	3156.9	7.14%
TATA-Box(TBP)/Promoter/Homer	CCTTTTAWAGSC	1e0	-1.057e+00	0.6887	23.0	2.54%	1020.5	2.31%
HEB(bHLH)/mES-Heb-ChIP-Seq(GSE53233)/Homer	VCAGCTGBNN	1e0	-1.040e+00	0.6954	140.0	15.47%	6627.2	14.98%
E-box(bHLH)/Promoter/Homer	SSGGTCACGTGA	1e0	-1.036e+00	0.6954	8.0	0.88%	327.6	0.74%
Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer	BTCAAGGTCA	1e0	-1.028e+00	0.6960	23.0	2.54%	1026.7	2.32%
Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer	TWGTCTGV	1e0	-1.013e+00	0.7031	116.0	12.82%	5482.7	12.39%
Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer	RCCACGTGGYYN	1e0	-1.011e+00	0.7031	31.0	3.43%	1408.4	3.18%
Prop1(Homeobox)/GHFT1-PROP1.biotin-ChIP-Seq(GSE77302)/Homer	NTAATBNAATTA	1e0	-9.970e-01	0.7069	5.0	0.55%	195.3	0.44%
Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer	NNNVCTGWGYAAACASN	1e0	-9.931e-01	0.7069	20.0	2.21%	892.7	2.02%
PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer	GCAGCCAAGCRTGACH	1e0	-9.784e-01	0.7127	24.0	2.65%	1084.5	2.45%
NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer	GGGGGAATCCCC	1e0	-9.776e-01	0.7127	7.0	0.77%	288.3	0.65%
Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer	MTGATGCAAT	1e0	-9.705e-01	0.7127	6.0	0.66%	244.0	0.55%
Gata4(Zf)/Heart-Gata4-ChIP-Seq(GSE35151)/Homer	NBWGATAAGR	1e0	-9.669e-01	0.7127	13.0	1.44%	568.1	1.28%
Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer	GYMATAAAAH	1e0	-9.603e-01	0.7127	7.0	0.77%	290.2	0.66%
Mouse_Recombination_Hotspot(Zf)/Testis-DMC1-ChIP-Seq(GSE24438)/Homer	ACTYKNATTCGTGNTACTTC	1e0	-9.467e-01	0.7134	1.0	0.11%	24.9	0.06%
Pax7(Paired,Homeobox)/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCAATTA	1e0	-9.467e-01	0.7134	1.0	0.11%	24.2	0.05%
MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer	TGCTGACTCA	1e0	-9.232e-01	0.7266	33.0	3.65%	1526.9	3.45%
Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer	ATTGCATCAT	1e0	-9.159e-01	0.7283	4.0	0.44%	157.4	0.36%
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer	GTCATGCHTGRCTGS	1e0	-8.788e-01	0.7520	20.0	2.21%	916.3	2.07%
PU.1-IRF(ETS:IRF)/Bcell-PU.1-ChIP-Seq(GSE21512)/Homer	MGGAAGTGAAAC	1e0	-8.737e-01	0.7522	36.0	3.98%	1684.7	3.81%
c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer	VCCACGTG	1e0	-8.729e-01	0.7522	43.0	4.75%	2021.3	4.57%
Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer	CCATTGTATGCAAAT	1e0	-8.693e-01	0.7522	2.0	0.22%	70.1	0.16%
bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer	KCACGTGMCN	1e0	-8.564e-01	0.7540	20.0	2.21%	922.0	2.08%
PAX6(Paired,Homeobox)/Forebrain-Pax6-ChIP-Seq(GSE66961)/Homer	NGTGTTCAVTSAAGCGKAAA	1e0	-8.470e-01	0.7575	3.0	0.33%	117.7	0.27%
Pitx1:Ebox(Homeobox,bHLH)/Hindlimb-Pitx1-ChIP-Seq(GSE41591)/Homer	YTAATTRAWWCCAGATGT	1e0	-8.366e-01	0.7617	2.0	0.22%	72.2	0.16%
IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer	GAAAGTGAAAGT	1e0	-8.346e-01	0.7617	3.0	0.33%	118.1	0.27%
GATA(Zf),IR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	NAGATWNBNATCTNN	1e0	-8.298e-01	0.7617	1.0	0.11%	28.7	0.06%
ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer	GAGCCTGGTACTGWGCCTGR	1e0	-8.260e-01	0.7617	17.0	1.88%	784.9	1.77%
Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer	KTGACCTTGA	1e0	-8.213e-01	0.7617	18.0	1.99%	833.8	1.88%
PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer	AAGAACATWHTGTTC	1e0	-8.190e-01	0.7617	4.0	0.44%	166.7	0.38%
HIF-1a(bHLH)/MCF7-HIF1a-ChIP-Seq(GSE28352)/Homer	TACGTGCV	1e0	-8.121e-01	0.7617	17.0	1.88%	787.6	1.78%
PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer	GSCTGTCACTCA	1e0	-8.104e-01	0.7617	3.0	0.33%	120.2	0.27%
MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer	RRCAGCTGYTSY	1e0	-8.086e-01	0.7617	62.0	6.85%	2963.2	6.70%
COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer	AGRGGTCA	1e0	-8.026e-01	0.7617	63.0	6.96%	3014.9	6.81%
Twist(bHLH)/HMLE-TWIST1-ChIP-Seq(Chang_et_al)/Homer	VCAKCTGGNNNCCAGMTGBN	1e0	-7.972e-01	0.7617	6.0	0.66%	263.9	0.60%
Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer	WWATRTAAACAN	1e0	-7.856e-01	0.7617	9.0	0.99%	408.3	0.92%
EBF1(EBF)/Near-E2A-ChIP-Seq(GSE21512)/Homer	GTCCCCWGGGGA	1e0	-7.803e-01	0.7617	64.0	7.07%	3072.7	6.95%
HOXB13(Homeobox)/ProstateTumor-HOXB13-ChIP-Seq(GSE56288)/Homer	TTTTATKRGG	1e0	-7.659e-01	0.7692	13.0	1.44%	604.9	1.37%
Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer	NNVVCAGCTGBN	1e0	-7.441e-01	0.7826	111.0	12.27%	5378.3	12.16%
CArG(MADS)/PUER-Srf-ChIP-Seq(Sullivan_et_al.)/Homer	CCATATATGGNM	1e0	-7.424e-01	0.7826	5.0	0.55%	222.9	0.50%
Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer	BSNTGTTTACWYWGN	1e0	-7.416e-01	0.7826	4.0	0.44%	174.2	0.39%
HRE(HSF)/Striatum-HSF1-ChIP-Seq(GSE38000)/Homer	TTCTAGAABNTTCTA	1e0	-7.324e-01	0.7826	4.0	0.44%	175.1	0.40%
Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer	SSCMATWAAA	1e0	-7.282e-01	0.7826	8.0	0.88%	369.7	0.84%
Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer	CTAATKGV	1e0	-7.238e-01	0.7826	33.0	3.65%	1586.6	3.59%
CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer	GHCACGTG	1e0	-7.221e-01	0.7826	28.0	3.09%	1343.7	3.04%
ETS:E-box(ETS,bHLH)/HPC7-Scl-ChIP-Seq(GSE22178)/Homer	AGGAARCAGCTG	1e0	-7.103e-01	0.7847	3.0	0.33%	129.1	0.29%
Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer	GGCCATAAATCA	1e0	-7.028e-01	0.7872	5.0	0.55%	227.5	0.51%
Ptf1a(bHLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer	ACAGCTGTTN	1e0	-7.009e-01	0.7872	167.0	18.45%	8139.3	18.40%
PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer	VAGRACAKNCTGTBC	1e0	-7.007e-01	0.7872	62.0	6.85%	3010.3	6.80%
NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer	GCCATCTGTT	1e0	-6.934e-01	0.7872	35.0	3.87%	1694.3	3.83%
Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer	CYAAAAATAG	1e0	-6.875e-01	0.7872	5.0	0.55%	229.3	0.52%
Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer	GTRGGTCASTGGGTCA	1e0	-6.725e-01	0.7940	5.0	0.55%	231.6	0.52%
RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer	AAACCACARM	1e0	-6.715e-01	0.7940	26.0	2.87%	1261.1	2.85%
Rfx2(HTH)/LoVo-RFX2-ChIP-Seq(GSE49402)/Homer	GTTGCCATGGCAACM	1e0	-6.652e-01	0.7940	5.0	0.55%	232.6	0.53%
FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer	AGGTCANTGACCTB	1e0	-6.595e-01	0.7942	17.0	1.88%	823.3	1.86%
Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer	NYTAATCCYB	1e0	-6.594e-01	0.7942	10.0	1.10%	479.4	1.08%
ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer	VCAGGTRDRY	1e0	-6.514e-01	0.7942	103.0	11.38%	5042.9	11.40%
Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer	AGGTGHCAGACA	1e0	-6.507e-01	0.7942	5.0	0.55%	234.3	0.53%
Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer	BTBRAGTGSN	1e0	-6.501e-01	0.7942	66.0	7.29%	3231.0	7.30%
HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer	GCACGTACCC	1e0	-6.457e-01	0.7942	19.0	2.10%	925.9	2.09%
bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer	NAGTTTCABTHTGACTNW	1e0	-6.233e-01	0.8032	4.0	0.44%	189.0	0.43%
FOXK1(Forkhead)/HEK293-FOXK1-ChIP-Seq(GSE51673)/Homer	NVWTGTTTAC	1e0	-6.226e-01	0.8032	13.0	1.44%	635.5	1.44%
ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer	GTCWGCTGTYYCTCT	1e0	-6.209e-01	0.8032	2.0	0.22%	88.0	0.20%
ZBTB18(Zf)/HEK293-ZBTB18.GFP-ChIP-Seq(GSE58341)/Homer	AACATCTGGA	1e0	-6.167e-01	0.8032	21.0	2.32%	1032.7	2.33%
RFX(HTH)/K562-RFX3-ChIP-Seq(SRA012198)/Homer	CGGTTGCCATGGCAAC	1e0	-6.157e-01	0.8032	5.0	0.55%	239.3	0.54%
Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer	GWAAYHTGAKMC	1e0	-6.143e-01	0.8032	17.0	1.88%	836.0	1.89%
PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	GGAAGTGAAAST	1e0	-6.080e-01	0.8032	4.0	0.44%	190.5	0.43%
E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer	CWGGCGGGAA	1e0	-6.031e-01	0.8032	33.0	3.65%	1629.3	3.68%
PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer	ADGGYAGYAGCATCT	1e0	-6.003e-01	0.8032	21.0	2.32%	1037.4	2.34%
Hnf1(Homeobox)/Liver-Foxa2-Chip-Seq(GSE25694)/Homer	GGTTAAWCATTAA	1e0	-5.981e-01	0.8032	1.0	0.11%	39.6	0.09%
PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer	RGGTCTCTAACY	1e0	-5.909e-01	0.8032	6.0	0.66%	293.1	0.66%
Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer	RSCACTYRAG	1e0	-5.889e-01	0.8032	92.0	10.17%	4541.5	10.27%
X-box(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	GGTTGCCATGGCAA	1e0	-5.784e-01	0.8032	4.0	0.44%	194.2	0.44%
RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer	GCTGTGGTTW	1e0	-5.717e-01	0.8032	17.0	1.88%	847.1	1.91%
ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer	GAGSCCGAGC	1e0	-5.587e-01	0.8101	26.0	2.87%	1299.1	2.94%
Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer	DCYAAAAATAGM	1e0	-5.572e-01	0.8101	4.0	0.44%	197.7	0.45%
HLF(bZIP)/HSC-HLF.Flag-ChIP-Seq(GSE69817)/Homer	RTTATGYAAB	1e0	-5.514e-01	0.8101	10.0	1.10%	502.1	1.13%
Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer	RRSCACTYAA	1e0	-5.501e-01	0.8101	65.0	7.18%	3234.2	7.31%
Slug(Zf)/Mesoderm-Snai2-ChIP-Seq(GSE61475)/Homer	SNGCACCTGCHS	1e0	-5.411e-01	0.8118	41.0	4.53%	2051.4	4.64%
HNF6(Homeobox)/Liver-Hnf6-ChIP-Seq(ERP000394)/Homer	NTATYGATCH	1e0	-5.395e-01	0.8118	6.0	0.66%	302.5	0.68%
Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATATTC	1e0	-5.357e-01	0.8118	1.0	0.11%	43.5	0.10%
ZNF136(Zf)/HEK293-ZNF136.GFP-ChIP-Seq(GSE58341)/Homer	YTKGATAHAGTATTCTWGGTNGGCA	1e0	-5.357e-01	0.8118	1.0	0.11%	43.5	0.10%
BMYB(HTH)/Hela-BMYB-ChIP-Seq(GSE27030)/Homer	NHAACBGYYV	1e0	-5.295e-01	0.8118	45.0	4.97%	2255.9	5.10%
AP-2alpha(AP2)/Hela-AP2alpha-ChIP-Seq(GSE31477)/Homer	ATGCCCTGAGGC	1e0	-5.092e-01	0.8224	69.0	7.62%	3456.0	7.81%
RARg(NR)/ES-RARg-ChIP-Seq(GSE30538)/Homer	AGGTCAAGGTCA	1e0	-5.077e-01	0.8224	1.0	0.11%	45.4	0.10%
GATA:SCL(Zf,bHLH)/Ter119-SCL-ChIP-Seq(GSE18720)/Homer	CRGCTGBNGNSNNSAGATAA	1e0	-5.000e-01	0.8238	2.0	0.22%	100.0	0.23%
NFAT(RHD)/Jurkat-NFATC1-ChIP-Seq(Jolma_et_al.)/Homer	ATTTTCCATT	1e0	-4.954e-01	0.8245	16.0	1.77%	820.1	1.85%
IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer	CTTTCANTATGACTV	1e0	-4.944e-01	0.8245	1.0	0.11%	46.5	0.11%
TCFL2(HMG)/K562-TCF7L2-ChIP-Seq(GSE29196)/Homer	ACWTCAAAGG	1e0	-4.944e-01	0.8245	1.0	0.11%	46.9	0.11%
Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer	TTRAGTGSYK	1e0	-4.938e-01	0.8245	60.0	6.63%	3019.5	6.83%
ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer	AAGGKGRCGCAGGCA	1e0	-4.923e-01	0.8245	13.0	1.44%	669.8	1.51%
GATA3(Zf)/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATAASR	1e0	-4.908e-01	0.8245	17.0	1.88%	872.9	1.97%
Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer	AGGTGTGAAM	1e0	-4.864e-01	0.8245	18.0	1.99%	924.6	2.09%
c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer	VVCCACGTGG	1e0	-4.735e-01	0.8245	23.0	2.54%	1181.3	2.67%
ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer	SMCAGTCWGAKGGAGGAGGC	1e0	-4.733e-01	0.8245	3.0	0.33%	157.9	0.36%
HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer	CARRGKBCAAAGTYCA	1e0	-4.678e-01	0.8245	11.0	1.22%	574.7	1.30%
HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer	NCYAATAAAA	1e0	-4.650e-01	0.8245	9.0	0.99%	472.5	1.07%
ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer	TGGAACAGMA	1e0	-4.641e-01	0.8245	26.0	2.87%	1336.7	3.02%
Nanog(Homeobox)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	RGCCATTAAC	1e0	-4.585e-01	0.8245	109.0	12.04%	5474.0	12.37%
RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer	TAGGGCAAAGGTCA	1e0	-4.546e-01	0.8245	43.0	4.75%	2194.4	4.96%
Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer	KGTTGCCATGGCAA	1e0	-4.542e-01	0.8245	8.0	0.88%	423.5	0.96%
PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer	ACTTTCACTTTC	1e0	-4.343e-01	0.8302	8.0	0.88%	428.2	0.97%
Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer	CTGTCTGG	1e0	-4.259e-01	0.8343	76.0	8.40%	3860.2	8.73%
CHR(?)/Hela-CellCycle-Expression/Homer	SRGTTTCAAA	1e0	-4.208e-01	0.8355	7.0	0.77%	379.4	0.86%
Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer	ATATGCAAAT	1e0	-4.156e-01	0.8370	3.0	0.33%	166.9	0.38%
Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer	GGGGCTYGKCTGGGA	1e0	-4.125e-01	0.8370	18.0	1.99%	951.5	2.15%
ZNF692(Zf)/HEK293-ZNF692.GFP-ChIP-Seq(GSE58341)/Homer	GTGGGCCCCA	1e0	-4.034e-01	0.8414	10.0	1.10%	541.9	1.22%
FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer	SCHTGTTTACAT	1e0	-3.989e-01	0.8423	9.0	0.99%	490.1	1.11%
PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer	TGACCTTTGCCCCA	1e0	-3.980e-01	0.8423	30.0	3.31%	1569.5	3.55%
ZNF415(Zf)/HEK293-ZNF415.GFP-ChIP-Seq(GSE58341)/Homer	GRTGMTRGAGCC	1e0	-3.961e-01	0.8423	30.0	3.31%	1570.8	3.55%
n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer	VRCCACGTGG	1e0	-3.954e-01	0.8423	37.0	4.09%	1925.2	4.35%
E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer	GGCGGGAAAH	1e0	-3.861e-01	0.8423	55.0	6.08%	2838.9	6.42%
ETS:RUNX(ETS,Runt)/Jurkat-RUNX1-ChIP-Seq(GSE17954)/Homer	RCAGGATGTGGT	1e0	-3.732e-01	0.8496	4.0	0.44%	229.5	0.52%
Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer	TAATCCCN	1e0	-3.709e-01	0.8496	87.0	9.61%	4453.5	10.07%
Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer	ASATCAAAGGVA	1e0	-3.646e-01	0.8512	6.0	0.66%	340.5	0.77%
REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer	GGMGCTGTCCATGGTGCTGA	1e0	-3.639e-01	0.8512	1.0	0.11%	58.0	0.13%
Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer	GKVTCADRTTWC	1e0	-3.597e-01	0.8512	3.0	0.33%	176.2	0.40%
Brn1(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	TATGCWAATBAV	1e0	-3.495e-01	0.8555	3.0	0.33%	178.6	0.40%
Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer	AAGCACTTAA	1e0	-3.382e-01	0.8623	64.0	7.07%	3327.1	7.52%
CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer	GCTAATCC	1e0	-3.373e-01	0.8623	37.0	4.09%	1960.3	4.43%
FOXP1(Forkhead)/H9-FOXP1-ChIP-Seq(GSE31006)/Homer	NYYTGTTTACHN	1e0	-3.372e-01	0.8623	4.0	0.44%	237.7	0.54%
Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer	CYTGTTTACWYW	1e0	-3.294e-01	0.8623	9.0	0.99%	512.0	1.16%
Phox2a(Homeobox)/Neuron-Phox2a-ChIP-Seq(GSE31456)/Homer	YTAATYNRATTA	1e0	-3.277e-01	0.8623	2.0	0.22%	125.0	0.28%
Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer	CGGTCACSCCAC	1e0	-3.165e-01	0.8668	4.0	0.44%	242.9	0.55%
THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer	GGTCANYTGAGGWCA	1e0	-3.093e-01	0.8703	13.0	1.44%	733.4	1.66%
Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer	BTCAAGGTCA	1e0	-2.981e-01	0.8772	14.0	1.55%	791.3	1.79%
GRE(NR),IR3/RAW264.7-GRE-ChIP-Seq(Unpublished)/Homer	VAGRACAKWCTGTYC	1e0	-2.970e-01	0.8772	4.0	0.44%	247.5	0.56%
HOXA2(Homeobox)/mES-Hoxa2-ChIP-Seq(Donaldson_et_al.)/Homer	GYCATCMATCAT	1e0	-2.858e-01	0.8823	1.0	0.11%	68.2	0.15%
Znf263(Zf)/K562-Znf263-ChIP-Seq(GSE31477)/Homer	CVGTSCTCCC	1e0	-2.510e-01	0.9106	112.0	12.38%	5834.3	13.19%
ZNF669(Zf)/HEK293-ZNF669.GFP-ChIP-Seq(GSE58341)/Homer	GARTGGTCATCGCCC	1e0	-2.432e-01	0.9148	3.0	0.33%	203.2	0.46%
Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer	CACAGCAGGGGG	1e0	-2.427e-01	0.9148	29.0	3.20%	1613.1	3.65%
Tbr1(T-box)/Cortex-Tbr1-ChIP-Seq(GSE71384)/Homer	AAGGTGTKAA	1e0	-2.387e-01	0.9148	22.0	2.43%	1249.0	2.82%
Barx1(Homeobox)/Stomach-Barx1.3xFlag-ChIP-Seq(GSE69483)/Homer	AAACMATTAN	1e0	-2.196e-01	0.9277	3.0	0.33%	210.3	0.48%
SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer	CAAGGHCANV	1e0	-2.112e-01	0.9326	10.0	1.10%	617.1	1.39%
Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer	CAAAGGTCAG	1e0	-2.059e-01	0.9346	84.0	9.28%	4479.1	10.12%
RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer	AGGTCAAGGTCA	1e0	-2.055e-01	0.9346	2.0	0.22%	151.1	0.34%
IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer	GRAASTGAAAST	1e0	-1.891e-01	0.9445	5.0	0.55%	342.1	0.77%
ARE(NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	RGRACASNSTGTYCYB	1e0	-1.803e-01	0.9499	5.0	0.55%	346.5	0.78%
Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGMATATDC	1e0	-1.793e-01	0.9499	7.0	0.77%	465.0	1.05%
Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer	TGACANARRCCAGRC	1e0	-1.738e-01	0.9500	9.0	0.99%	582.0	1.32%
FoxL2(Forkhead)/Ovary-FoxL2-ChIP-Seq(GSE60858)/Homer	WWTRTAAACAVG	1e0	-1.728e-01	0.9500	6.0	0.66%	410.0	0.93%
Cux2(Homeobox)/Liver-Cux2-ChIP-Seq(GSE35985)/Homer	HNRAATCAAT	1e0	-1.712e-01	0.9500	3.0	0.33%	227.3	0.51%
EBF(EBF)/proBcell-EBF-ChIP-Seq(GSE21978)/Homer	DGTCCCYRGGGA	1e0	-1.632e-01	0.9514	7.0	0.77%	473.1	1.07%
Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer	ATTTGCATAW	1e0	-1.452e-01	0.9657	4.0	0.44%	302.0	0.68%
RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer	AAYTAGGTCA	1e0	-1.412e-01	0.9666	1.0	0.11%	99.4	0.22%
ERE(NR),IR3/MCF7-ERa-ChIP-Seq(Unpublished)/Homer	VAGGTCACNSTGACC	1e0	-1.347e-01	0.9699	6.0	0.66%	431.5	0.98%
Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer	GKTAATGR	1e0	-1.290e-01	0.9725	28.0	3.09%	1669.2	3.77%
THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer	TRAGGTCA	1e0	-1.241e-01	0.9743	139.0	15.36%	7423.6	16.78%
SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer	AAAGRGGAAGTG	1e0	-1.237e-01	0.9743	4.0	0.44%	314.5	0.71%
VDR(NR),DR3/GM10855-VDR+vitD-ChIP-Seq(GSE22484)/Homer	ARAGGTCANWGAGTTCANNN	1e0	-1.236e-01	0.9743	3.0	0.33%	249.7	0.56%
Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer	TGATTRATGGCY	1e0	-1.160e-01	0.9743	1.0	0.11%	108.5	0.25%
OCT:OCT-short(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	ATGCATWATGCATRW	1e0	-1.111e-01	0.9752	4.0	0.44%	322.7	0.73%
Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer	GGCCYCCTGCTGDGH	1e0	-1.080e-01	0.9754	44.0	4.86%	2557.7	5.78%
GRE(NR),IR3/A549-GR-ChIP-Seq(GSE32465)/Homer	NRGVACABNVTGTYCY	1e0	-1.069e-01	0.9754	2.0	0.22%	190.0	0.43%
Eomes(T-box)/H9-Eomes-ChIP-Seq(GSE26097)/Homer	ATTAACACCT	1e0	-9.846e-02	0.9788	35.0	3.87%	2092.7	4.73%
SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer	AVCAGCTG	1e0	-9.805e-02	0.9788	258.0	28.51%	13479.7	30.47%
Pit1+1bp(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer	ATGCATAATTCA	1e0	-9.545e-02	0.9788	1.0	0.11%	117.8	0.27%
Brachyury(T-box)/Mesoendoderm-Brachyury-ChIP-exo(GSE54963)/Homer	ANTTMRCASBNNNGTGYKAAN	1e0	-5.637e-02	1.0000	2.0	0.22%	226.3	0.51%
AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer	CCAGGAACAG	1e0	-4.802e-02	1.0000	137.0	15.14%	7592.8	17.16%
MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer	HWWGTCAGCAWWTTT	1e0	-4.446e-02	1.0000	1.0	0.11%	153.7	0.35%
GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer	CGTGGGTGGTCC	1e0	-3.708e-02	1.0000	2.0	0.22%	250.7	0.57%
Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer	ASWTCAAAGG	1e0	-3.248e-02	1.0000	1.0	0.11%	168.9	0.38%
Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer	CCTGCTGAGH	1e0	-1.001e-02	1.0000	40.0	4.42%	2720.6	6.15%
ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer	NGNTCTAGAACCNGV	1e0	-8.259e-03	1.0000	4.0	0.44%	502.2	1.14%
LRF(Zf)/Erythroblasts-ZBTB7A-ChIP-Seq(GSE74977)/Homer	AAGACCCYYN	1e0	-7.500e-05	1.0000	97.0	10.72%	6625.6	14.98%
FOXA1:AR(Forkhead,NR)/LNCAP-AR-ChIP-Seq(GSE27824)/Homer	AGTAAACAAAAAAGAACAND	1e0	0.000e+00	1.0000	0.0	0.00%	15.9	0.04%
DUX4(Homeobox)/Myoblasts-DUX4.V5-ChIP-Seq(GSE75791)/Homer	NWTAAYCYAATCAWN	1e0	0.000e+00	1.0000	0.0	0.00%	11.5	0.03%
EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer	GGYAGCAYDTGCTDCCCNNN	1e0	0.000e+00	1.0000	0.0	0.00%	39.9	0.09%
GATA3(Zf),DR4/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATGKDGAGATAAG	1e0	0.000e+00	1.0000	0.0	0.00%	25.0	0.06%
GATA3(Zf),DR8/iTreg-Gata3-ChIP-Seq(GSE20898)/Homer	AGATSTNDNNDSAGATAASN	1e0	0.000e+00	1.0000	0.0	0.00%	31.8	0.07%
HNF1b(Homeobox)/PDAC-HNF1B-ChIP-Seq(GSE64557)/Homer	GTTAATNATTAA	1e0	0.000e+00	1.0000	0.0	0.00%	47.4	0.11%
NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer	WNTGTTTRYTTTGGCA	1e0	0.000e+00	1.0000	0.0	0.00%	44.0	0.10%
OCT:OCT(POU,Homeobox,IR1)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer	ATGAATWATTCATGA	1e0	0.000e+00	1.0000	0.0	0.00%	3.6	0.01%
OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer	ATGAATATTCATGAG	1e0	0.000e+00	1.0000	0.0	0.00%	4.9	0.01%
OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer	YATGCATATRCATRT	1e0	0.000e+00	1.0000	0.0	0.00%	30.5	0.07%
Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	NTAATTDGCYAATTANNWWD	1e0	0.000e+00	1.0000	0.0	0.00%	7.1	0.02%
Pax7(Paired,Homeobox),long/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer	TAATCHGATTAC	1e0	0.000e+00	1.0000	0.0	0.00%	8.7	0.02%
T1ISRE(IRF)/ThioMac-Ifnb-Expression/Homer	ACTTTCGTTTCT	1e0	0.000e+00	1.0000	0.0	0.00%	5.3	0.01%
ZFP3(Zf)/HEK293-ZFP3.GFP-ChIP-Seq(GSE58341)/Homer	GGGTTTTGAAGGATGARTAGGAGTT	1e0	0.000e+00	1.0000	0.0	0.00%	2.5	0.01%
ZNF16(Zf)/HEK293-ZNF16.GFP-ChIP-Seq(GSE58341)/Homer	MACCTTCYATGGCTCCCTAKTGCCY	1e0	0.000e+00	1.0000	0.0	0.00%	12.8	0.03%
ZNF41(Zf)/HEK293-ZNF41.GFP-ChIP-Seq(GSE58341)/Homer	CCTCATGGTGYCYTWYTCCCTTGTG	1e0	0.000e+00	1.0000	0.0	0.00%	20.3	0.05%
ZNF675(Zf)/HEK293-ZNF675.GFP-ChIP-Seq(GSE58341)/Homer	ARGAGGMCAAAATGW	1e0	0.000e+00	1.0000	0.0	0.00%	115.1	0.26%