Information for 4-TKGCGCAGCTTCC (Motif 4)

A G C T A C T G A C T G A T G C A C T G A G T C C G T A A C T G A G T C A C G T A G C T A T G C A G T C
Reverse Opposite:
A C T G A T C G C T G A G T C A A C T G A G T C A C G T A C T G A G T C A T C G A G T C G T A C C T G A
p-value:1e-13
log p-value:-3.073e+01
Information Content per bp:1.871
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.88%
Number of Background Sequences with motif4.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.0 +/- 17.3bp
Average Position of motif in Background30.4 +/- 22.3bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.66
Offset:3
Orientation:forward strand
Alignment:TKGCGCAGCTTCC
---CGCAGCTGCG
 A G C T A C T G A C T G A T G C A C T G A G T C C G T A A C T G A G T C A C G T A G C T A T G C A G T C
A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

Myog/MA0500.1/Jaspar

Match Rank:2
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TKGCGCAGCTTCC
--NNGCAGCTGTC
 A G C T A C T G A C T G A T G C A C T G A G T C C G T A A C T G A G T C A C G T A G C T A T G C A G T C
A C G T A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C

PB0003.1_Ascl2_1/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TKGCGCAGCTTCC---
NNNNAGCAGCTGCTGAN
 A C G T A G C T A C T G A C T G A T G C A C T G A G T C C G T A A C T G A G T C A C G T A G C T A T G C A G T C A C G T A C G T A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:4
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TKGCGCAGCTTCC
-NNAGCAGCTGCT
 A G C T A C T G A C T G A T G C A C T G A G T C C G T A A C T G A G T C A C G T A G C T A T G C A G T C
A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

Myod1/MA0499.1/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TKGCGCAGCTTCC---
---TGCAGCTGTCCCT
 A G C T A C T G A C T G A T G C A C T G A G T C C G T A A C T G A G T C A C G T A G C T A T G C A G T C A C G T A C G T A C G T
A C G T A C G T A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

Ascl2/MA0816.1/Jaspar

Match Rank:6
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TKGCGCAGCTTCC
---AGCAGCTGCT
 A G C T A C T G A C T G A T G C A C T G A G T C C G T A A C T G A G T C A C G T A G C T A T G C A G T C
A C G T A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:7
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:TKGCGCAGCTTCC-
----GCAGCTGTNN
 A G C T A C T G A C T G A T G C A C T G A G T C C G T A A C T G A G T C A C G T A G C T A T G C A G T C A C G T
A C G T A C G T A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T

Tcf12/MA0521.1/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TKGCGCAGCTTCC
--NNGCAGCTGTT
 A G C T A C T G A C T G A T G C A C T G A G T C C G T A A C T G A G T C A C G T A G C T A T G C A G T C
A C G T A C G T A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T

POL008.1_DCE_S_I/Jaspar

Match Rank:9
Score:0.56
Offset:7
Orientation:forward strand
Alignment:TKGCGCAGCTTCC
-------GCTTCC
 A G C T A C T G A C T G A T G C A C T G A G T C C G T A A C T G A G T C A C G T A G C T A T G C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G A T G C A G C T A C G T A T G C A T G C

POL009.1_DCE_S_II/Jaspar

Match Rank:10
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:TKGCGCAGCTTCC
---CACAGN----
 A G C T A C T G A C T G A T G C A C T G A G T C C G T A A C T G A G T C A C G T A G C T A T G C A G T C
A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T