Information for 9-AAGGHGTGYC (Motif 18)

T C G A C T G A C T A G A C T G G T A C A C T G A C G T A T C G G A C T A G T C
Reverse Opposite:
T C A G C T G A T A G C T G C A T G A C C A T G A G T C A G T C G A C T A G C T
p-value:1e-8
log p-value:-1.947e+01
Information Content per bp:1.576
Number of Target Sequences with motif45.0
Percentage of Target Sequences with motif4.97%
Number of Background Sequences with motif807.1
Percentage of Background Sequences with motif1.82%
Average Position of motif in Targets42.5 +/- 22.0bp
Average Position of motif in Background51.2 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0180.1_Sp4_2/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--AAGGHGTGYC---
CAAAGGCGTGGCCAG
 A C G T A C G T T C G A C T G A C T A G A C T G G T A C A C T G A C G T A T C G G A C T A G T C A C G T A C G T A C G T
A G T C C G T A C G T A T C G A A T C G A C T G G T A C A C T G A C G T C T A G A C T G G A T C G A T C G T C A C A T G

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:AAGGHGTGYC
DGGGYGKGGC
 T C G A C T G A C T A G A C T G G T A C A C T G A C G T A T C G G A C T A G T C
C G T A C T A G A C T G A C T G G A C T C T A G C A G T C T A G C A T G G A T C

TBX5/MA0807.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AAGGHGTGYC
-AGGTGTGA-
 T C G A C T G A C T A G A C T G G T A C A C T G A C G T A T C G G A C T A G T C
A C G T C T G A T C A G A C T G A C G T C T A G A G C T A C T G C T G A A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:4
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AAGGHGTGYC
NTCAAGGTCA---
 A C G T A C G T A C G T T C G A C T G A C T A G A C T G G T A C A C T G A C G T A T C G G A C T A G T C
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T

TBX15/MA0803.1/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AAGGHGTGYC
-AGGTGTGA-
 T C G A C T G A C T A G A C T G G T A C A C T G A C G T A T C G G A C T A G T C
A C G T C T G A C T A G T C A G A C G T A T C G A G C T A C T G C T G A A C G T

HLTF/MA0109.1/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----AAGGHGTGYC
NNATAAGGNN----
 A C G T A C G T A C G T A C G T T C G A C T G A C T A G A C T G G T A C A C T G A C G T A T C G G A C T A G T C
C G T A A C G T G T C A G C A T C G T A C G T A A C T G A C T G C G A T G C A T A C G T A C G T A C G T A C G T

PROX1/MA0794.1/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AAGGHGTGYC-
TAAGGCGTCTTG
 A C G T T C G A C T G A C T A G A C T G G T A C A C T G A C G T A T C G G A C T A G T C A C G T
A G C T T C G A G T C A T C A G C T A G G T A C C T A G A G C T G A T C C G A T G A C T T C A G

TBX4/MA0806.1/Jaspar

Match Rank:8
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AAGGHGTGYC
-AGGTGTGA-
 T C G A C T G A C T A G A C T G G T A C A C T G A C G T A T C G G A C T A G T C
A C G T C T G A T C A G T A C G A G C T A C T G G A C T A C T G C T G A A C G T

TBX21/MA0690.1/Jaspar

Match Rank:9
Score:0.59
Offset:0
Orientation:forward strand
Alignment:AAGGHGTGYC
AAGGTGTGAA
 T C G A C T G A C T A G A C T G G T A C A C T G A C G T A T C G G A C T A G T C
C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A

TBX1/MA0805.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:forward strand
Alignment:AAGGHGTGYC
-AGGTGTGA-
 T C G A C T G A C T A G A C T G G T A C A C T G A C G T A T C G G A C T A G T C
A C G T C T G A T C A G A C T G A G C T A T C G G A C T A C T G T G C A A C G T