Information for 7-GCAGCAGCTGCCCAGC (Motif 14)

A C T G A T G C G T C A A T C G A T G C G C T A A T C G A T G C G A C T C T A G A T G C G T A C A G T C C G T A C T A G A T G C
Reverse Opposite:
T A C G A G T C G C A T A C T G A C T G A T C G A G T C C T G A A T C G A T G C C G A T A T C G A T G C A C G T A T C G A G T C
p-value:1e-9
log p-value:-2.077e+01
Information Content per bp:1.774
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif1.22%
Number of Background Sequences with motif39.2
Percentage of Background Sequences with motif0.09%
Average Position of motif in Targets59.6 +/- 24.8bp
Average Position of motif in Background38.7 +/- 21.9bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:GCAGCAGCTGCCCAGC
NNAGCAGCTGCT----
 A C T G A T G C G T C A A T C G A T G C G C T A A T C G A T G C G A C T C T A G A T G C G T A C A G T C C G T A C T A G A T G C
T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GCAGCAGCTGCCCAGC
-CAGCAGCTGN-----
 A C T G A T G C G T C A A T C G A T G C G C T A A T C G A T G C G A C T C T A G A T G C G T A C A G T C C G T A C T A G A T G C
A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:reverse strand
Alignment:--GCAGCAGCTGCCCAGC
NNNNAGCAGCTGCTGAN-
 A C G T A C G T A C T G A T G C G T C A A T C G A T G C G C T A A T C G A T G C G A C T C T A G A T G C G T A C A G T C C G T A C T A G A T G C
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:4
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GCAGCAGCTGCCCAGC
--AGCAGCTGCT----
 A C T G A T G C G T C A A T C G A T G C G C T A A T C G A T G C G A C T C T A G A T G C G T A C A G T C C G T A C T A G A T G C
A C G T A C G T T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.61
Offset:8
Orientation:reverse strand
Alignment:GCAGCAGCTGCCCAGC--
--------TGCCCAGNHW
 A C T G A T G C G T C A A T C G A T G C G C T A A T C G A T G C G A C T C T A G A T G C G T A C A G T C C G T A C T A G A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCAGCAGCTGCCCAGC
AGATGCTRCTRCCHT--
 A C G T A C T G A T G C G T C A A T C G A T G C G C T A A T C G A T G C G A C T C T A G A T G C G T A C A G T C C G T A C T A G A T G C
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T A C G T A C G T

Myod1/MA0499.1/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCAGCAGCTGCCCAGC
NGNGACAGCTGCN----
 A C G T A C T G A T G C G T C A A T C G A T G C G C T A A T C G A T G C G A C T C T A G A T G C G T A C A G T C C G T A C T A G A T G C
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GCAGCAGCTGCCCAGC
-NNGCAGCTGTC----
 A C T G A T G C G T C A A T C G A T G C G C T A A T C G A T G C G A C T C T A G A T G C G T A C A G T C C G T A C T A G A T G C
A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T A C G T

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:forward strand
Alignment:GCAGCAGCTGCCCAGC
VNAVCAGCTGGC----
 A C T G A T G C G T C A A T C G A T G C G C T A A T C G A T G C G A C T C T A G A T G C G T A C A G T C C G T A C T A G A T G C
T C A G A C G T T C G A T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G T C A C G T A C G T A C G T A C G T

EBNA1(EBV-virus)/Raji-EBNA1-ChIP-Seq(GSE30709)/Homer

Match Rank:10
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GCAGCAGCTGCCCAGC
GGYAGCAYDTGCTDCCCNNN
 A C G T A C G T A C G T A C G T A C T G A T G C G T C A A T C G A T G C G C T A A T C G A T G C G A C T C T A G A T G C G T A C A G T C C G T A C T A G A T G C
A C T G C T A G G A T C C G T A C T A G A G T C T G C A G A C T C G T A A C G T T C A G A G T C A C G T C T G A A G T C A G T C G A T C C G T A T C A G T A C G