Information for 6-ARAGCCSAAGGCG (Motif 6)

C G T A C T G A C G T A A C T G A G T C T A G C A T G C C G T A C T G A C T A G C T A G A G T C A T C G
Reverse Opposite:
A T G C A C T G A G T C A G T C A G C T A C G T A T C G A C T G C T A G A G T C A C G T A G C T A C G T
p-value:1e-10
log p-value:-2.508e+01
Information Content per bp:1.850
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif13.2
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets45.0 +/- 29.7bp
Average Position of motif in Background44.2 +/- 25.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:1
Score:0.67
Offset:2
Orientation:forward strand
Alignment:ARAGCCSAAGGCG
--AGCCTCAGGCA
 C G T A C T G A C G T A A C T G A G T C T A G C A T G C C G T A C T G A C T A G C T A G A G T C A T C G
A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T G C A T C A G T A C G T A G C C G T A

TFAP2C(var.2)/MA0814.1/Jaspar

Match Rank:2
Score:0.66
Offset:2
Orientation:forward strand
Alignment:ARAGCCSAAGGCG
--AGCCTCAGGCA
 C G T A C T G A C G T A A C T G A G T C T A G C A T G C C G T A C T G A C T A G C T A G A G T C A T C G
A C G T A C G T G T C A T A C G A T G C A G T C A G C T T A G C T C G A T C A G A T C G T A G C C G T A

TFAP2A/MA0003.3/Jaspar

Match Rank:3
Score:0.64
Offset:2
Orientation:forward strand
Alignment:ARAGCCSAAGGCG
--CGCCTCAGGCA
 C G T A C T G A C G T A A C T G A G T C T A G C A T G C C G T A C T G A C T A G C T A G A G T C A T C G
A C G T A C G T G T A C T A C G A T G C A G T C A G C T T A G C T G C A T C A G A T C G T A G C C G T A

Nr5a2/MA0505.1/Jaspar

Match Rank:4
Score:0.61
Offset:1
Orientation:forward strand
Alignment:ARAGCCSAAGGCG---
-AAGTTCAAGGTCAGC
 C G T A C T G A C G T A A C T G A G T C T A G C A T G C C G T A C T G A C T A G C T A G A G T C A T C G A C G T A C G T A C G T
A C G T T C G A C T G A C T A G A G C T G A C T T A G C G T C A C T G A C T A G A C T G G A C T A G T C C G T A A C T G A T G C

PB0088.1_Tcfap2e_1/Jaspar

Match Rank:5
Score:0.59
Offset:0
Orientation:forward strand
Alignment:ARAGCCSAAGGCG--
ATTGCCTGAGGCAAT
 C G T A C T G A C G T A A C T G A G T C T A G C A T G C C G T A C T G A C T A G C T A G A G T C A T C G A C G T A C G T
G C T A G C A T G C A T A T C G A G T C A G T C A G C T A T C G T C G A T C A G A C T G T A G C C T A G G C T A C G A T

PB0190.1_Tcfap2b_2/Jaspar

Match Rank:6
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:ARAGCCSAAGGCG--
ANTGCCTGAGGCAAN
 C G T A C T G A C G T A A C T G A G T C T A G C A T G C C G T A C T G A C T A G C T A G A G T C A T C G A C G T A C G T
C G T A C A G T G A C T C A T G G A T C G A T C C A G T T A C G T G C A C A T G C A T G A G T C C G T A G T C A G A C T

SPI1/MA0080.4/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--ARAGCCSAAGGCG
AAAAAGCGGAAGTA-
 A C G T A C G T C G T A C T G A C G T A A C T G A G T C T A G C A T G C C G T A C T G A C T A G C T A G A G T C A T C G
T C G A C T G A C G T A C G T A C G T A T A C G T G A C C T A G A T C G G T C A C G T A A T C G G A C T C G T A A C G T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:8
Score:0.57
Offset:2
Orientation:forward strand
Alignment:ARAGCCSAAGGCG-
--AGGTCAAGGTCA
 C G T A C T G A C G T A A C T G A G T C T A G C A T G C C G T A C T G A C T A G C T A G A G T C A T C G A C G T
A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:9
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-ARAGCCSAAGGCG
GAAASYGAAASY--
 A C G T C G T A C T G A C G T A A C T G A G T C T A G C A T G C C G T A C T G A C T A G C T A G A G T C A T C G
C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:forward strand
Alignment:----ARAGCCSAAGGCG
GGCAAAAGTCCAATAA-
 A C G T A C G T A C G T A C G T C G T A C T G A C G T A A C T G A G T C T A G C A T G C C G T A C T G A C T A G C T A G A G T C A T C G
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T A C G T