Information for 6-AAGTATATCT (Motif 5)

C G T A C G T A A C T G A C G T C G T A C G A T C G T A A G C T G T A C A G C T
Reverse Opposite:
C T G A A C T G C T G A A C G T C G T A A C G T C G T A A G T C A C G T A C G T
p-value:1e-11
log p-value:-2.621e+01
Information Content per bp:1.891
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif4.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets50.4 +/- 35.7bp
Average Position of motif in Background53.9 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0003.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:AAGTATATCT-
AAGGATATNTN
 C G T A C G T A A C T G A C G T C G T A C G A T C G T A A G C T G T A C A G C T A C G T
T C G A C G T A C T A G T A C G C G T A A G C T C G T A A C G T A G T C C G A T C G A T

FOXB1/MA0845.1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AAGTATATCT
TATGTAAATAT
 A C G T C G T A C G T A A C T G A C G T C G T A C G A T C G T A A G C T G T A C A G C T
G C A T C T G A C G A T C T A G G A C T T G C A G C T A C G T A A G C T C T G A G C A T

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AAGTATATCT
AAAGTAAACA-
 A C G T C G T A C G T A A C T G A C G T C G T A C G A T C G T A A G C T G T A C A G C T
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T

FOXC1/MA0032.2/Jaspar

Match Rank:4
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AAGTATATCT
TATGTAAATAT
 A C G T C G T A C G T A A C T G A C G T C G T A C G A T C G T A A G C T G T A C A G C T
G C A T C T G A C G A T T C A G G C A T G T C A G T C A C T G A A G C T C T G A G C A T

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:5
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AAGTATATCT
AAAGTAAACA-
 A C G T C G T A C G T A A C T G A C G T C G T A C G A T C G T A A G C T G T A C A G C T
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A A C G T

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:6
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-AAGTATATCT
WAAGTAAAYA-
 A C G T C G T A C G T A A C T G A C G T C G T A C G A T C G T A A G C T G T A C A G C T
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A A C G T

FOXA1/MA0148.3/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--AAGTATATCT---
CAAAGTAAACANNNN
 A C G T A C G T C G T A C G T A A C T G A C G T C G T A C G A T C G T A A G C T G T A C A G C T A C G T A C G T A C G T
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

PB0163.1_Six6_2/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--AAGTATATCT-----
ANNNGGATATATCCNNN
 A C G T A C G T C G T A C G T A A C T G A C G T C G T A C G A T C G T A A G C T G T A C A G C T A C G T A C G T A C G T A C G T A C G T
G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:9
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---AAGTATATCT----
AAAAAGTAAACAAAGAC
 A C G T A C G T A C G T C G T A C G T A A C T G A C G T C G T A C G A T C G T A A G C T G T A C A G C T A C G T A C G T A C G T A C G T
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

Foxa2/MA0047.2/Jaspar

Match Rank:10
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---AAGTATATCT
NCTAAGTAAACA-
 A C G T A C G T A C G T C G T A C G T A A C T G A C G T C G T A C G A T C G T A A G C T G T A C A G C T
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A A C G T