Information for 6-TTGTTAGATGGGA (Motif 6)

A C G T A C G T C T A G A C G T A C G T C G T A A C T G G T C A A C G T A C T G T A C G C T A G G T C A
Reverse Opposite:
A C G T A G T C A G T C A G T C C G T A A C G T A G T C C G A T G T C A C G T A A G T C C G T A C G T A
p-value:1e-12
log p-value:-2.816e+01
Information Content per bp:1.824
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.87%
Number of Background Sequences with motif6.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.6 +/- 27.6bp
Average Position of motif in Background78.2 +/- 18.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1/MA0070.1/Jaspar

Match Rank:1
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TTGTTAGATGGGA
TTTGATTGATGN--
 A C G T A C G T A C G T C T A G A C G T A C G T C G T A A C T G G T C A A C G T A C T G T A C G C T A G G T C A
C G A T G C A T C A G T A C T G G T C A C G A T A C G T A C T G C G T A A C G T A C T G C A T G A C G T A C G T

MF0011.1_HMG_class/Jaspar

Match Rank:2
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TTGTTAGATGGGA
ATTGTT--------
 A C G T A C G T A C G T C T A G A C G T A C G T C G T A A C T G G T C A A C G T A C T G T A C G C T A G G T C A
G C T A A C G T G A C T C T A G G C A T A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

SRY/MA0084.1/Jaspar

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-TTGTTAGATGGGA
ATTGTTTAN-----
 A C G T A C G T A C G T C T A G A C G T A C G T C G T A A C T G G T C A A C G T A C T G T A C G C T A G G T C A
G C T A A G C T A C G T C T A G C G A T C G A T G C A T G C T A G T A C A C G T A C G T A C G T A C G T A C G T

Sox5/MA0087.1/Jaspar

Match Rank:4
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-TTGTTAGATGGGA
ATTGTTA-------
 A C G T A C G T A C G T C T A G A C G T A C G T C G T A A C T G G T C A A C G T A C T G T A C G C T A G G T C A
C G T A A C G T A C G T C T A G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0119.1_Foxa2_2/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----TTGTTAGATGGGA
NCNTTTGTTATTTNN--
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T A C G T C G T A A C T G G T C A A C G T A C T G T A C G C T A G G T C A
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T A C G T A C G T

PH0134.1_Pbx1/Jaspar

Match Rank:6
Score:0.58
Offset:-2
Orientation:reverse strand
Alignment:--TTGTTAGATGGGA--
NNNNNATTGATGNGTGN
 A C G T A C G T A C G T A C G T C T A G A C G T A C G T C G T A A C T G G T C A A C G T A C T G T A C G C T A G G T C A A C G T A C G T
A C G T A C T G G C A T C G A T C A G T G C T A C G A T A C G T A C T G C G T A G A C T A C T G C A T G C T A G G C A T T C A G C T G A

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:7
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---TTGTTAGATGGGA
CCATTGTTNY------
 A C G T A C G T A C G T A C G T A C G T C T A G A C G T A C G T C G T A A C T G G T C A A C G T A C T G T A C G C T A G G T C A
A T G C G T A C C G T A A G C T G C A T T A C G A G C T A G C T A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

ZNF410/MA0752.1/Jaspar

Match Rank:8
Score:0.57
Offset:-5
Orientation:reverse strand
Alignment:-----TTGTTAGATGGGA
GANTATTATGGGATGGA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T A C G T C G T A A C T G G T C A A C G T A C T G T A C G C T A G G T C A
C A T G T C G A C A T G G A C T C T G A A G C T A C G T C T G A C A G T A T C G A C T G C A T G G T C A C G A T C T A G A C T G T G C A A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TTGTTAGATGGGA
-TGATTGATGA--
 A C G T A C G T C T A G A C G T A C G T C G T A A C T G G T C A A C G T A C T G T A C G C T A G G T C A
A C G T C G A T T C A G G T C A A G C T C G A T C T A G C G T A A C G T C A T G C T G A A C G T A C G T

PB0172.1_Sox1_2/Jaspar

Match Rank:10
Score:0.56
Offset:-6
Orientation:forward strand
Alignment:------TTGTTAGATGGGA
CTATAATTGTTAGCG----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T A C G T C G T A A C T G G T C A A C G T A C T G T A C G C T A G G T C A
G T A C A G C T C T G A G A C T G C T A C T G A G A C T A G C T T A C G A C G T A C G T T G C A A C G T A G T C T A C G A C G T A C G T A C G T A C G T