Information for 12-DCAAAGCCAATCT (Motif 21)

C A T G A G T C C G T A C T G A C G T A A C T G A G T C A G T C G T C A C G T A A G C T A G T C A C G T
Reverse Opposite:
C G T A A C T G C T G A C G A T A C G T A C T G C T A G A G T C A C G T A G C T A C G T A C T G G A T C
p-value:1e-6
log p-value:-1.441e+01
Information Content per bp:1.846
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif15.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets47.1 +/- 22.4bp
Average Position of motif in Background46.6 +/- 29.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0029.1_Hic1_1/Jaspar

Match Rank:1
Score:0.59
Offset:0
Orientation:forward strand
Alignment:DCAAAGCCAATCT---
ACTATGCCAACCTACC
 C A T G A G T C C G T A C T G A C G T A A C T G A G T C A G T C G T C A C G T A A G C T A G T C A C G T A C G T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

NFY(CCAAT)/Promoter/Homer

Match Rank:2
Score:0.58
Offset:4
Orientation:forward strand
Alignment:DCAAAGCCAATCT-
----AGCCAATCGG
 C A T G A G T C C G T A C T G A C G T A A C T G A G T C A G T C G T C A C G T A A G C T A G T C A C G T A C G T
A C G T A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:DCAAAGCCAATCT
-ACTAGCCAATCA
 C A T G A G T C C G T A C T G A C G T A A C T G A G T C A G T C G T C A C G T A A G C T A G T C A C G T
A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

HNF4G/MA0484.1/Jaspar

Match Rank:4
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----DCAAAGCCAATCT
AGAGTCCAAAGTCCA---
 A C G T A C G T A C G T A C G T A C G T C A T G A G T C C G T A C T G A C G T A A C T G A G T C A G T C G T C A C G T A A G C T A G T C A C G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:5
Score:0.57
Offset:4
Orientation:reverse strand
Alignment:DCAAAGCCAATCT
----TGCCAA---
 C A T G A G T C C G T A C T G A C G T A A C T G A G T C A G T C G T C A C G T A A G C T A G T C A C G T
A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:6
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------DCAAAGCCAATCT
CANAGNNCAAAGTCCA---
 A C G T A C G T A C G T A C G T A C G T A C G T C A T G A G T C C G T A C T G A C G T A A C T G A G T C A G T C G T C A C G T A A G C T A G T C A C G T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:DCAAAGCCAATCT
--CGTGCCAAG--
 C A T G A G T C C G T A C T G A C G T A A C T G A G T C A G T C G T C A C G T A A G C T A G T C A C G T
A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---DCAAAGCCAATCT
ACATCAAAGG------
 A C G T A C G T A C G T C A T G A G T C C G T A C T G A C G T A A C T G A G T C A G T C G T C A C G T A A G C T A G T C A C G T
C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T A C G T A C G T A C G T

Nr2e1/MA0676.1/Jaspar

Match Rank:9
Score:0.56
Offset:1
Orientation:forward strand
Alignment:DCAAAGCCAATCT
-AAAAGTCAA---
 C A T G A G T C C G T A C T G A C G T A A C T G A G T C A G T C G T C A C G T A A G C T A G T C A C G T
A C G T G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:10
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-DCAAAGCCAATCT
NTCAAGGTCA----
 A C G T C A T G A G T C C G T A C T G A C G T A A C T G A G T C A G T C G T C A C G T A A G C T A G T C A C G T
A C G T G A C T A T G C G C T A C T G A C T A G A C T G G A C T A G T C C G T A A C G T A C G T A C G T A C G T