Information for 10-AAATAGCTATTAT (Motif 16)

C G T A C G T A C G T A A C G T C G T A A C T G A G T C A C G T C G T A C G A T A C G T C G T A A C G T
Reverse Opposite:
C G T A A C G T G T C A C G T A A C G T C G T A A C T G G T A C A C G T C G T A C G A T A C G T A C G T
p-value:1e-9
log p-value:-2.121e+01
Information Content per bp:1.913
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.8 +/- 17.2bp
Average Position of motif in Background36.0 +/- 27.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0135.1_Hoxa3_2/Jaspar

Match Rank:1
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AAATAGCTATTAT--
-AAAAACCATTAAGG
 C G T A C G T A C G T A A C G T C G T A A C T G A G T C A C G T C G T A C G A T A C G T C G T A A C G T A C G T A C G T
A C G T T C G A G T C A C T G A G C T A C G T A T G A C A G T C T G C A C G A T G C A T C G T A C T G A A T C G T C A G

Mef2c(MADS)/GM12878-Mef2c-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.62
Offset:-5
Orientation:forward strand
Alignment:-----AAATAGCTATTAT
DCYAAAAATAGM------
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T C G T A A C T G A G T C A C G T C G T A C G A T A C G T C G T A A C G T
C A T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G A C T C T G A T C A G G T A C A C G T A C G T A C G T A C G T A C G T A C G T

Mef2b(MADS)/HEK293-Mef2b.V5-ChIP-Seq(GSE67450)/Homer

Match Rank:3
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----AAATAGCTATTAT
KCCAAAAATAGC------
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T C G T A A C T G A G T C A C G T C G T A C G A T A C G T C G T A A C G T
A C T G G T A C G A T C G C T A C G T A C T G A C G T A C G T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T A C G T A C G T A C G T

Mef2a(MADS)/HL1-Mef2a.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:4
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AAATAGCTATTAT
CCAAAAATAG-------
 A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T C G T A A C T G A G T C A C G T C G T A C G A T A C G T C G T A A C G T
G T A C G A C T C G T A C T G A T C G A C G T A G C T A C A G T C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Mef2d(MADS)/Retina-Mef2d-ChIP-Seq(GSE61391)/Homer

Match Rank:5
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----AAATAGCTATTAT
GCTAAAAATAGC------
 A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T C G T A A C T G A G T C A C G T C G T A C G A T A C G T C G T A A C G T
A C T G G T A C G A C T G C T A C G T A C G T A C G T A G C T A G C A T C T G A T C A G G T A C A C G T A C G T A C G T A C G T A C G T A C G T

MEF2C/MA0497.1/Jaspar

Match Rank:6
Score:0.59
Offset:-7
Orientation:forward strand
Alignment:-------AAATAGCTATTAT
ATGCTAAAAATAGAA-----
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T C G T A A C T G A G T C A C G T C G T A C G A T A C G T C G T A A C G T
C T G A C G A T C A T G G T A C A G C T G C T A C T G A C T G A C G T A C G T A G A C T C T G A T C A G G T C A G C T A A C G T A C G T A C G T A C G T A C G T

PH0154.1_Prrx1/Jaspar

Match Rank:7
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------AAATAGCTATTAT
GTAACTAATTAACTACT--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T C G T A A C T G A G T C A C G T C G T A C G A T A C G T C G T A A C G T
T A C G A C G T G T C A T C G A A G T C G A C T T C G A C T G A A G C T A G C T C T G A T C G A A G T C C A G T C T G A T A G C A G C T A C G T A C G T

PH0094.1_Lhx4/Jaspar

Match Rank:8
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------AAATAGCTATTAT
TAAACTAATTAGCTTTG--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T C G T A A C T G A G T C A C G T C G T A C G A T A C G T C G T A A C G T
C A G T G T C A C G T A T C G A A T G C G A C T T C G A C T G A A G C T A G C T C T G A A T C G A T G C A C G T C G A T A C G T C T A G A C G T A C G T

Tcf21/MA0832.1/Jaspar

Match Rank:9
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-AAATAGCTATTAT
GCAACAGCTGTTGT
 A C G T C G T A C G T A C G T A A C G T C G T A A C T G A G T C A C G T C G T A C G A T A C G T C G T A A C G T
T C A G G A T C C T G A G T C A A G T C G T C A A C T G A G T C A C G T A C T G A C G T G A C T T C A G A G C T

PH0074.1_Hoxd1/Jaspar

Match Rank:10
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------AAATAGCTATTAT
TAAACTAATTAGCTGTA--
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A A C G T C G T A A C T G A G T C A C G T C G T A C G A T A C G T C G T A A C G T
C G A T T C G A G C T A T C A G A G T C G A C T T G C A C G T A C G A T A C G T C T G A T C A G A G T C A C G T A C T G C A G T G C T A A C G T A C G T