Information for 7-ACCGACGCATGGA (Motif 6)

C G T A T A G C G A T C A T C G C T G A A G T C A C T G A G T C G T C A C A G T A C T G A C T G C G T A
Reverse Opposite:
A C G T A G T C A G T C G C T A A C G T A C T G A G T C C T A G A G C T A T G C C A T G A C T G A C G T
p-value:1e-11
log p-value:-2.616e+01
Information Content per bp:1.822
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif2.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets57.2 +/- 17.8bp
Average Position of motif in Background17.1 +/- 12.8bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:1
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--ACCGACGCATGGA
SCAGYCADGCATGAC
 A C G T A C G T C G T A T A G C G A T C A T C G C T G A A G T C A C T G A G T C G T C A C A G T A C T G A C T G C G T A
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

PB0147.1_Max_2/Jaspar

Match Rank:2
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:ACCGACGCATGGA--
-NNGTCGCGTGNCAC
 C G T A T A G C G A T C A T C G C T G A A G T C A C T G A G T C G T C A C A G T A C T G A C T G C G T A A C G T A C G T
A C G T G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C

PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--ACCGACGCATGGA-
GCAGCCAAGCGTGACN
 A C G T A C G T C G T A T A G C G A T C A T C G C T G A A G T C A C T G A G T C G T C A C A G T A C T G A C T G C G T A A C G T
A C T G G A T C C T G A A T C G A G T C T A G C C T G A C G T A T A C G A G T C C T A G C A G T T C A G T C G A T G A C G A T C

PB0179.1_Sp100_2/Jaspar

Match Rank:4
Score:0.53
Offset:-6
Orientation:reverse strand
Alignment:------ACCGACGCATGGA
NNTTTANNCGACGNA----
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A G C G A T C A T C G C T G A A G T C A C T G A G T C G T C A C A G T A C T G A C T G C G T A
T A G C G C A T C G A T C G A T C G A T G T C A T G C A C A T G A G T C A C T G C G T A A G T C C T A G T A C G T C G A A C G T A C G T A C G T A C G T

Pax6/MA0069.1/Jaspar

Match Rank:5
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-ACCGACGCATGGA
AANTCATGCGTGAA
 A C G T C G T A T A G C G A T C A T C G C T G A A G T C A C T G A G T C G T C A C A G T A C T G A C T G C G T A
G T C A T C G A A G T C G A C T A T G C C T G A C G A T A T C G G A T C C T A G A C G T C T A G C G T A T C G A

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-ACCGACGCATGGA
CRCCCACGCA----
 A C G T C G T A T A G C G A T C A T C G C T G A A G T C A C T G A G T C G T C A C A G T A C T G A C T G C G T A
G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A A C G T A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:7
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:ACCGACGCATGGA
---CACGCA----
 C G T A T A G C G A T C A T C G C T G A A G T C A C T G A G T C G T C A C A G T A C T G A C T G C G T A
A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T

EGR2/MA0472.2/Jaspar

Match Rank:8
Score:0.50
Offset:-2
Orientation:forward strand
Alignment:--ACCGACGCATGGA
ACGCCCACGCA----
 A C G T A C G T C G T A T A G C G A T C A T C G C T G A A G T C A C T G A G T C G T C A C A G T A C T G A C T G C G T A
G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A A C G T A C G T A C G T A C G T

Hes1/MA1099.1/Jaspar

Match Rank:9
Score:0.49
Offset:3
Orientation:reverse strand
Alignment:ACCGACGCATGGA
---NNCGCGTGNN
 C G T A T A G C G A T C A T C G C T G A A G T C A C T G A G T C G T C A C A G T A C T G A C T G C G T A
A C G T A C G T A C G T C A T G C T G A T G A C C T A G A G T C T C A G G A C T C T A G A T G C A T G C

PAX5/MA0014.2/Jaspar

Match Rank:10
Score:0.49
Offset:-6
Orientation:forward strand
Alignment:------ACCGACGCATGGA
GAGGGCAGCCAAGCGTGAC
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A G C G A T C A T C G C T G A A G T C A C T G A G T C G T C A C A G T A C T G A C T G C G T A
T C A G C G T A T C A G C T A G A C T G G A T C C T G A T A C G A G T C T A G C T C G A C T G A A T C G A G T C C T A G C A G T C T A G C T G A G T A C