Information for 2-TGTCCDTGGTGCTGAA (Motif 4)

A C G T A C T G C G A T A G T C A G T C C A G T C G A T A C T G A C T G A C G T A T C G A G T C A C G T A C T G C G T A C G T A
Reverse Opposite:
A C G T A C G T A G T C C G T A A C T G A T G C C G T A A G T C A G T C C G T A G C T A C T A G A C T G G C T A A G T C C G T A
p-value:1e-13
log p-value:-3.030e+01
Information Content per bp:1.873
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.64%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets61.3 +/- 27.8bp
Average Position of motif in Background24.5 +/- 1.8bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST/MA0138.2/Jaspar

Match Rank:1
Score:0.87
Offset:-5
Orientation:reverse strand
Alignment:-----TGTCCDTGGTGCTGAA
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T A G T C A G T C C A G T C G A T A C T G A C T G A C G T A T C G A G T C A C G T A C T G C G T A C G T A
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:2
Score:0.84
Offset:-5
Orientation:forward strand
Alignment:-----TGTCCDTGGTGCTGAA
GGAGCTGTCCATGGTGCTGA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T A G T C A G T C C A G T C G A T A C T G A C T G A C G T A T C G A G T C A C G T A C T G C G T A C G T A
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A A C G T

Tbx20(T-box)/Heart-Tbx20-ChIP-Seq(GSE29636)/Homer

Match Rank:3
Score:0.54
Offset:7
Orientation:forward strand
Alignment:TGTCCDTGGTGCTGAA---
-------GGTGYTGACAGS
 A C G T A C T G C G A T A G T C A G T C C A G T C G A T A C T G A C T G A C G T A T C G A G T C A C G T A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A T C G G A C T A C T G G A C T C A G T C T A G C G T A G T A C C G T A C T A G A T C G

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--TGTCCDTGGTGCTGAA
BNTGDCCTTG--------
 A C G T A C G T A C G T A C T G C G A T A G T C A G T C C A G T C G A T A C T G A C T G A C G T A T C G A G T C A C G T A C T G C G T A C G T A
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:5
Score:0.54
Offset:9
Orientation:forward strand
Alignment:TGTCCDTGGTGCTGAA---
---------TGCTGACTCA
 A C G T A C T G C G A T A G T C A G T C C A G T C G A T A C T G A C T G A C G T A T C G A G T C A C G T A C T G C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A

MAFK/MA0496.1/Jaspar

Match Rank:6
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:TGTCCDTGGTGCTGAA----
-----AAANTGCTGACTNAG
 A C G T A C T G C G A T A G T C A G T C C A G T C G A T A C T G A C T G A C G T A T C G A G T C A C G T A C T G C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G

NRL/MA0842.1/Jaspar

Match Rank:7
Score:0.53
Offset:5
Orientation:forward strand
Alignment:TGTCCDTGGTGCTGAA
-----AATTTGCTGAC
 A C G T A C T G C G A T A G T C A G T C C A G T C G A T A C T G A C T G A C G T A T C G A G T C A C G T A C T G C G T A C G T A
A C G T A C G T A C G T A C G T A C G T C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C

Mafb/MA0117.2/Jaspar

Match Rank:8
Score:0.53
Offset:5
Orientation:forward strand
Alignment:TGTCCDTGGTGCTGAA-
-----AAAATGCTGACT
 A C G T A C T G C G A T A G T C A G T C C A G T C G A T A C T G A C T G A C G T A T C G A G T C A C G T A C T G C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:TGTCCDTGGTGCTGAA
TGACCTTGAV------
 A C G T A C T G C G A T A G T C A G T C C A G T C G A T A C T G A C T G A C G T A T C G A G T C A C G T A C T G C G T A C G T A
G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-TGTCCDTGGTGCTGAA
CTGACCTTTG-------
 A C G T A C G T A C T G C G A T A G T C A G T C C A G T C G A T A C T G A C T G A C G T A T C G A G T C A C G T A C T G C G T A C G T A
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T