p-value: | 1e-5 |
log p-value: | -1.190e+01 |
Information Content per bp: | 1.910 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.43% |
Number of Background Sequences with motif | 6.7 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 48.7 +/- 10.8bp |
Average Position of motif in Background | 45.1 +/- 30.0bp |
Strand Bias (log2 ratio + to - strand density) | -1.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer
Match Rank: | 1 |
Score: | 0.56 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --AGTCTAGCTGGAC SCAGYCADGCATGAC |
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PAX1/MA0779.1/Jaspar
Match Rank: | 2 |
Score: | 0.56 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---AGTCTAGCTGGAC- NGCANTCATGCGTGACG |
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PAX5(Paired,Homeobox)/GM12878-PAX5-ChIP-Seq(GSE32465)/Homer
Match Rank: | 3 |
Score: | 0.55 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --AGTCTAGCTGGAC- GCAGCCAAGCGTGACN |
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PAX9/MA0781.1/Jaspar
Match Rank: | 4 |
Score: | 0.54 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---AGTCTAGCTGGAC- TGCAGTCATGCGTGACG |
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PAX5/MA0014.2/Jaspar
Match Rank: | 5 |
Score: | 0.54 |
Offset: | -6 |
Orientation: | forward strand |
Alignment: | ------AGTCTAGCTGGAC GAGGGCAGCCAAGCGTGAC |
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Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer
Match Rank: | 6 |
Score: | 0.53 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -AGTCTAGCTGGAC TWGTCTGV------ |
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Tcf21(bHLH)/ArterySmoothMuscle-Tcf21-ChIP-Seq(GSE61369)/Homer
Match Rank: | 7 |
Score: | 0.52 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | AGTCTAGCTGGAC ---CCAGCTGTTN |
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ZEB1(Zf)/PDAC-ZEB1-ChIP-Seq(GSE64557)/Homer
Match Rank: | 8 |
Score: | 0.52 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | AGTCTAGCTGGAC -RYHYACCTGB-- |
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GFX(?)/Promoter/Homer
Match Rank: | 9 |
Score: | 0.52 |
Offset: | 0 |
Orientation: | forward strand |
Alignment: | AGTCTAGCTGGAC ATTCTCGCGAGA- |
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ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer
Match Rank: | 10 |
Score: | 0.51 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | AGTCTAGCTGGAC- ----WDNCTGGGCA |
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