Information for 11-TCCRGGCTCA (Motif 16)

A G C T A T G C G T A C C T A G A C T G C A T G A T G C C G A T G A T C T G C A
Reverse Opposite:
A C G T C T A G G C T A T A C G G T A C T G A C G A T C C A T G T A C G T C G A
p-value:1e-8
log p-value:-1.898e+01
Information Content per bp:1.541
Number of Target Sequences with motif21.0
Percentage of Target Sequences with motif2.25%
Number of Background Sequences with motif223.3
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets50.7 +/- 26.9bp
Average Position of motif in Background50.3 +/- 26.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0030.1_Hnf4a_1/Jaspar

Match Rank:1
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--TCCRGGCTCA-----
CTCCAGGGGTCAATTGA
 A C G T A C G T A G C T A T G C G T A C C T A G A C T G C A T G A T G C C G A T G A T C T G C A A C G T A C G T A C G T A C G T A C G T
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A

AR-halfsite(NR)/LNCaP-AR-ChIP-Seq(GSE27824)/Homer

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TCCRGGCTCA-
-CCAGGAACAG
 A G C T A T G C G T A C C T A G A C T G C A T G A T G C C G A T G A T C T G C A A C G T
A C G T T A G C G T A C C G T A C T A G A C T G T G C A C G T A A T G C C G T A A T C G

PB0057.1_Rxra_1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--TCCRGGCTCA-----
NTNNNGGGGTCANGNNN
 A C G T A C G T A G C T A T G C G T A C C T A G A C T G C A T G A T G C C G A T G A T C T G C A A C G T A C G T A C G T A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

PB0153.1_Nr2f2_2/Jaspar

Match Rank:4
Score:0.64
Offset:-2
Orientation:forward strand
Alignment:--TCCRGGCTCA----
CGCGCCGGGTCACGTA
 A C G T A C G T A G C T A T G C G T A C C T A G A C T G C A T G A T G C C G A T G A T C T G C A A C G T A C G T A C G T A C G T
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A

Bach2(bZIP)/OCILy7-Bach2-ChIP-Seq(GSE44420)/Homer

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TCCRGGCTCA
TGCTGAGTCA
 A G C T A T G C G T A C C T A G A C T G C A T G A T G C C G A T G A T C T G C A
C G A T T A C G T G A C G A C T C A T G C G T A T A C G A C G T G T A C C T G A

RHOXF1/MA0719.1/Jaspar

Match Rank:6
Score:0.61
Offset:3
Orientation:reverse strand
Alignment:TCCRGGCTCA-
---NGGATTAN
 A G C T A T G C G T A C C T A G A C T G C A T G A T G C C G A T G A T C T G C A A C G T
A C G T A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T

PB0157.1_Rara_2/Jaspar

Match Rank:7
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--TCCRGGCTCA----
AGAGCGGGGTCAAGTA
 A C G T A C G T A G C T A T G C G T A C C T A G A C T G C A T G A T G C C G A T G A T C T G C A A C G T A C G T A C G T A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

PB0118.1_Esrra_2/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--TCCRGGCTCA-----
GGCGAGGGGTCAAGGGC
 A C G T A C G T A G C T A T G C G T A C C T A G A C T G C A T G A T G C C G A T G A T C T G C A A C G T A C G T A C G T A C G T A C G T
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C

AP-1(bZIP)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TCCRGGCTCA--
--ATGACTCATC
 A G C T A T G C G T A C C T A G A C T G C A T G A T G C C G A T G A T C T G C A A C G T A C G T
A C G T A C G T T C G A A C G T C A T G G C T A T A G C C G A T G T A C G C T A A C G T A T G C

FOSL1/MA0477.1/Jaspar

Match Rank:10
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:TCCRGGCTCA--
-NATGAGTCACC
 A G C T A T G C G T A C C T A G A C T G C A T G A T G C C G A T G A T C T G C A A C G T A C G T
A C G T A T G C T G C A A C G T A C T G C G T A A T C G A C G T A G T C C G T A A G T C G A T C