Information for 9-AAAGTACACA (Motif 18)

G T C A G T C A C G T A T A C G A C G T C T G A G T A C C G T A T G A C C G T A
Reverse Opposite:
G C A T A C T G A C G T A C T G G A C T T G C A A T G C A C G T A C G T A C G T
p-value:1e-7
log p-value:-1.749e+01
Information Content per bp:1.833
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.89%
Number of Background Sequences with motif153.6
Percentage of Background Sequences with motif0.32%
Average Position of motif in Targets48.1 +/- 26.4bp
Average Position of motif in Background49.5 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:AAAGTACACA
AAAGTAAACA
 G T C A G T C A C G T A T A C G A C G T C T G A G T A C C G T A T G A C C G T A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:2
Score:0.74
Offset:0
Orientation:forward strand
Alignment:AAAGTACACA
AAAGTAAACA
 G T C A G T C A C G T A T A C G A C G T C T G A G T A C C G T A T G A C C G T A
G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A

PB0134.1_Hnf4a_2/Jaspar

Match Rank:3
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----AAAGTACACA--
GGCAAAAGTCCAATAA
 A C G T A C G T A C G T A C G T G T C A G T C A C G T A T A C G A C G T C T G A G T A C C G T A T G A C C G T A A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

FOXA1/MA0148.3/Jaspar

Match Rank:4
Score:0.71
Offset:-1
Orientation:reverse strand
Alignment:-AAAGTACACA----
CAAAGTAAACANNNN
 A C G T G T C A G T C A C G T A T A C G A C G T C T G A G T A C C G T A T G A C C G T A A C G T A C G T A C G T A C G T
G T A C G C T A T C G A C G T A C T A G A G C T G T C A G T C A C G T A A G T C G C T A C G A T T A C G T C A G C T G A

PB0015.1_Foxa2_1/Jaspar

Match Rank:5
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--AAAGTACACA-----
AAAAAGTAAACAAAGAC
 A C G T A C G T G T C A G T C A C G T A T A C G A C G T C T G A G T A C C G T A T G A C C G T A A C G T A C G T A C G T A C G T A C G T
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

Foxa2/MA0047.2/Jaspar

Match Rank:6
Score:0.69
Offset:-2
Orientation:reverse strand
Alignment:--AAAGTACACA
NCTAAGTAAACA
 A C G T A C G T G T C A G T C A C G T A T A C G A C G T C T G A G T A C C G T A T G A C C G T A
T A G C G T A C G C A T T C G A C G T A C T A G A G C T G T C A T G C A C G T A A G T C C G T A

FOXM1(Forkhead)/MCF7-FOXM1-ChIP-Seq(GSE72977)/Homer

Match Rank:7
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:AAAGTACACA
WAAGTAAAYA
 G T C A G T C A C G T A T A C G A C G T C T G A G T A C C G T A T G A C C G T A
G C A T T C G A C T G A T C A G A G C T G T C A G T C A C T G A A G T C T G C A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:8
Score:0.68
Offset:-8
Orientation:forward strand
Alignment:--------AAAGTACACA
CANAGNNCAAAGTCCA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A G T C A C G T A T A C G A C G T C T G A G T A C C G T A T G A C C G T A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T A C G T

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:9
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:AAAGTACACA--
TATGTAAACANG
 G T C A G T C A C G T A T A C G A C G T C T G A G T A C C G T A T G A C C G T A A C G T A C G T
G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G

FOXP1/MA0481.1/Jaspar

Match Rank:10
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AAAGTACACA---
CAAAAGTAAACAAAG
 A C G T A C G T G T C A G T C A C G T A T A C G A C G T C T G A G T A C C G T A T G A C C G T A A C G T A C G T A C G T
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G