p-value: | 1e-6 |
log p-value: | -1.476e+01 |
Information Content per bp: | 1.906 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.49% |
Number of Background Sequences with motif | 1.2 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 58.5 +/- 22.0bp |
Average Position of motif in Background | 55.6 +/- 19.1bp |
Strand Bias (log2 ratio + to - strand density) | 0.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer
Match Rank: | 1 |
Score: | 0.66 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GTCACAAGAGGCC GTCACATGAY--- |
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Rarg(var.2)/MA0860.1/Jaspar
Match Rank: | 2 |
Score: | 0.63 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GTCACAAGAGGCC- AAGGTCACGAAAGGTCA |
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CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer
Match Rank: | 3 |
Score: | 0.62 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GTCACAAGAGGCC----- TGGCCACCAGGTGGCACTNT |
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THRa(NR)/C17.2-THRa-ChIP-Seq(GSE38347)/Homer
Match Rank: | 4 |
Score: | 0.61 |
Offset: | -1 |
Orientation: | forward strand |
Alignment: | -GTCACAAGAGGCC- GGTCANYTGAGGWCA |
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LXRE(NR),DR4/RAW-LXRb.biotin-ChIP-Seq(GSE21512)/Homer
Match Rank: | 5 |
Score: | 0.61 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GTCACAAGAGGCC- GGGTTACTANAGGTCA |
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CTCF/MA0139.1/Jaspar
Match Rank: | 6 |
Score: | 0.60 |
Offset: | -2 |
Orientation: | forward strand |
Alignment: | --GTCACAAGAGGCC---- TGGCCACCAGGGGGCGCTA |
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ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer
Match Rank: | 7 |
Score: | 0.59 |
Offset: | 8 |
Orientation: | forward strand |
Alignment: | GTCACAAGAGGCC--- --------AGGCCTNG |
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BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer
Match Rank: | 8 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GTCACAAGAGGCC------- GCCASCAGGGGGCGCYVNNG |
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Nr1h3::Rxra/MA0494.1/Jaspar
Match Rank: | 9 |
Score: | 0.58 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----GTCACAAGAGGCC- NNGAGGTTACTNNAGGTCA |
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ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer
Match Rank: | 10 |
Score: | 0.57 |
Offset: | 8 |
Orientation: | forward strand |
Alignment: | GTCACAAGAGGCC--- --------AGGCCTAG |
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