Information for 18-TGCTAAGCAAAAH (Motif 20)

A G C T A C T G G T A C A C G T C T G A C G T A A C T G A G T C C G T A C G T A C T G A C G T A G A T C
Reverse Opposite:
C A T G A C G T A G C T A C G T A C G T A C T G A G T C A C G T A G C T C G T A A C T G G T A C C T G A
p-value:1e-9
log p-value:-2.118e+01
Information Content per bp:1.863
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.86%
Number of Background Sequences with motif3.4
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets56.3 +/- 20.1bp
Average Position of motif in Background62.5 +/- 7.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRL/MA0842.1/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:TGCTAAGCAAAAH
--GTCAGCANNTN
 A G C T A C T G G T A C A C G T C T G A C G T A A C T G A G T C C G T A C G T A C T G A C G T A G A T C
A C G T A C G T T C A G C G A T G T A C C G T A C A T G A G T C C T G A C G T A C G T A G C A T G C A T

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:2
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---TGCTAAGCAAAAH
KGTTGCTAGGMAACA-
 A C G T A C G T A C G T A G C T A C T G G T A C A C G T C T G A C G T A A C T G A G T C C G T A C G T A C T G A C G T A G A T C
C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A A C G T

MAFK/MA0496.1/Jaspar

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TGCTAAGCAAAAH
CTGAGTCAGCAATTT
 A C G T A C G T A G C T A C T G G T A C A C G T C T G A C G T A A C T G A G T C C G T A C G T A C T G A C G T A G A T C
G T A C G C A T C T A G C G T A T A C G A G C T G T A C C G T A A C T G A T G C G C T A C G T A G C A T G C A T G C A T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:TGCTAAGCAAAAH
TGCTGACTCA---
 A G C T A C T G G T A C A C G T C T G A C G T A A C T G A G T C C G T A C G T A C T G A C G T A G A T C
G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-TGCTAAGCAAAAH-
HWWGTCAGCAWWTTT
 A C G T A G C T A C T G G T A C A C G T C T G A C G T A A C T G A G T C C G T A C G T A C T G A C G T A G A T C A C G T
G T A C C G T A C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A C G A T G C A T G C A T G A C T

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-TGCTAAGCAAAAH
HTGCTGAGTCAT--
 A C G T A G C T A C T G G T A C A C G T C T G A C G T A A C T G A G T C C G T A C G T A C T G A C G T A G A T C
G T C A G C A T A C T G G T A C G A C T A C T G G C T A A T C G C A G T G T A C C G T A A G C T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:7
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--TGCTAAGCAAAAH
CCTGCTGAGH-----
 A C G T A C G T A G C T A C T G G T A C A C G T C T G A C G T A A C T G A G T C C G T A C G T A C T G A C G T A G A T C
A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T A C G T A C G T

MAFF/MA0495.1/Jaspar

Match Rank:8
Score:0.54
Offset:-3
Orientation:forward strand
Alignment:---TGCTAAGCAAAAH--
GCTGAGTCAGCAATTTTT
 A C G T A C G T A C G T A G C T A C T G G T A C A C G T C T G A C G T A A C T G A G T C C G T A C G T A C T G A C G T A G A T C A C G T A C G T
A T C G G T A C G C A T C T A G C G T A T A C G G C A T G T A C C G T A C A T G A G T C C G T A C G T A G C A T G C A T G C A T G A C T G C A T

Fox:Ebox(Forkhead,bHLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TGCTAAGCAAAAH--
NNNVCTGWGYAAACASN
 A C G T A C G T A G C T A C T G G T A C A C G T C T G A C G T A A C T G A G T C C G T A C G T A C T G A C G T A G A T C A C G T A C G T
A T G C C T G A A T C G T A C G A G T C C G A T T C A G C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A T A C G C T G A

STAT6(Stat)/Macrophage-Stat6-ChIP-Seq(GSE38377)/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:TGCTAAGCAAAAH
TTCTNMGGAA---
 A G C T A C T G G T A C A C G T C T G A C G T A A C T G A G T C C G T A C G T A C T G A C G T A G A T C
C A G T G C A T A T G C G A C T C T A G T G C A C T A G C T A G G C T A C T G A A C G T A C G T A C G T