Information for 5-CGGCCACACG (Motif 2)

A G T C T A C G A C T G A G T C A G T C C T G A A T G C C T G A G T A C A C T G
Reverse Opposite:
T G A C A C T G A G C T A T C G G A C T A C T G A C T G A G T C A T G C T C A G
p-value:1e-11
log p-value:-2.701e+01
Information Content per bp:1.835
Number of Target Sequences with motif20.0
Percentage of Target Sequences with motif2.20%
Number of Background Sequences with motif128.3
Percentage of Background Sequences with motif0.27%
Average Position of motif in Targets39.6 +/- 25.6bp
Average Position of motif in Background50.3 +/- 32.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GLI2/MA0734.1/Jaspar

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-CGGCCACACG-
GCGACCACACTG
 A C G T A G T C T A C G A C T G A G T C A G T C C T G A A T G C C T G A G T A C A C T G A C G T
C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:CGGCCACACG--
--GCCACACCCA
 A G T C T A C G A C T G A G T C A G T C C T G A A T G C C T G A G T A C A C T G A C G T A C G T
A C G T A C G T C T A G G T A C A G T C T G C A A G T C C T G A A G T C A G T C A G T C G C T A

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:3
Score:0.67
Offset:1
Orientation:reverse strand
Alignment:CGGCCACACG---
-GGCCACACCCAN
 A G T C T A C G A C T G A G T C A G T C C T G A A T G C C T G A G T A C A C T G A C G T A C G T A C G T
A C G T C T A G C T A G T G A C A G T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A A C T G

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:4
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--CGGCCACACG
YCCGCCCACGCN
 A C G T A C G T A G T C T A C G A C T G A G T C A G T C C T G A A T G C C T G A G T A C A C T G
G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:5
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:CGGCCACACG---
-GGCCACRCCCMK
 A G T C T A C G A C T G A G T C A G T C C T G A A T G C C T G A G T A C A C T G A C G T A C G T A C G T
A C G T C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G

Klf1/MA0493.1/Jaspar

Match Rank:6
Score:0.65
Offset:1
Orientation:forward strand
Alignment:CGGCCACACG--
-GGCCACACCCA
 A G T C T A C G A C T G A G T C A G T C C T G A A T G C C T G A G T A C A C T G A C G T A C G T
A C G T C T A G T C A G T G A C G A T C G T C A A G T C C T G A A G T C A G T C A G T C G C T A

MITF(bHLH)/MastCells-MITF-ChIP-Seq(GSE48085)/Homer

Match Rank:7
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:CGGCCACACG--
--GTCACATGAY
 A G T C T A C G A C T G A G T C A G T C C T G A A T G C C T G A G T A C A C T G A C G T A C G T
A C G T A C G T T C A G G A C T G T A C G T C A A G T C T C G A G C A T A T C G T C G A A G T C

Hes1/MA1099.1/Jaspar

Match Rank:8
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CGGCCACACG--
--GGCACGCGTC
 A G T C T A C G A C T G A G T C A G T C C T G A A T G C C T G A G T A C A C T G A C G T A C G T
A C G T A C G T T A C G T A C G G A T C C T G A A G T C T C A G G A T C A C T G G A C T G T A C

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CGGCCACACG
CRCCCACGCA
 A G T C T A C G A C T G A G T C A G T C C T G A A T G C C T G A G T A C A C T G
G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:10
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CGGCCACACG--
--GCCMCRCCCH
 A G T C T A C G A C T G A G T C A G T C C T G A A T G C C T G A G T A C A C T G A C G T A C G T
A C G T A C G T C T A G G T A C G A T C G T C A G A T C C T G A A G T C A G T C A G T C G C A T