Information for 7-CCGTGTGGCC (Motif 2)

A T G C T G A C A T C G A C G T T C A G A C G T A T C G A T C G T A G C G T A C
Reverse Opposite:
C A T G A T C G A T G C T A G C T G C A A G T C T G C A T A G C A C T G T A C G
p-value:1e-22
log p-value:-5.284e+01
Information Content per bp:1.688
Number of Target Sequences with motif89.0
Percentage of Target Sequences with motif9.76%
Number of Background Sequences with motif1330.6
Percentage of Background Sequences with motif2.80%
Average Position of motif in Targets45.9 +/- 27.3bp
Average Position of motif in Background51.2 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Klf4(Zf)/mES-Klf4-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.66
Offset:-1
Orientation:reverse strand
Alignment:-CCGTGTGGCC
TGGGTGTGGC-
 A C G T A T G C T G A C A T C G A C G T T C A G A C G T A T C G A T C G T A G C G T A C
C G A T A C T G A C T G A C T G A G C T A C T G A C G T C T A G C A T G G A T C A C G T

EKLF(Zf)/Erythrocyte-Klf1-ChIP-Seq(GSE20478)/Homer

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--CCGTGTGGCC
NTGGGTGTGGCC
 A C G T A C G T A T G C T G A C A T C G A C G T T C A G A C G T A T C G A T C G T A G C G T A C
T G A C C G A T A C T G A C T G A C T G G A C T A C T G A C G T A C T G A C T G G A T C G A T C

GLI2/MA0734.1/Jaspar

Match Rank:3
Score:0.65
Offset:0
Orientation:reverse strand
Alignment:CCGTGTGGCC--
CAGTGTGGTCGC
 A T G C T G A C A T C G A C G T T C A G A C G T A T C G A T C G T A G C G T A C A C G T A C G T
G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.63
Offset:0
Orientation:forward strand
Alignment:CCGTGTGGCC
CTGTCTGG--
 A T G C T G A C A T C G A C G T T C A G A C G T A T C G A T C G T A G C G T A C
A T G C G A C T A C T G C A G T G A T C A C G T T A C G T A C G A C G T A C G T

Klf1/MA0493.1/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CCGTGTGGCC
TGGGTGTGGCN
 A C G T A T G C T G A C A T C G A C G T T C A G A C G T A T C G A T C G T A G C G T A C
C G A T C T A G A C T G A C T G G A C T A C T G C A G T C T A G A C T G A G T C G A T C

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:6
Score:0.62
Offset:0
Orientation:reverse strand
Alignment:CCGTGTGGCC--
NNHTGTGGTTWN
 A T G C T G A C A T C G A C G T T C A G A C G T A T C G A T C G T A G C G T A C A C G T A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--CCGTGTGGCC
VBSYGTCTGG--
 A C G T A C G T A T G C T G A C A T C G A C G T T C A G A C G T A T C G A T C G T A G C G T A C
T A C G A T C G T A G C G A T C A C T G A C G T A G T C A C G T C T A G A T C G A C G T A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--CCGTGTGGCC
MKGGGYGTGGCC
 A C G T A C G T A T G C T G A C A T C G A C G T T C A G A C G T A T C G A T C G T A G C G T A C
G T A C C A G T A C T G A C T G A C T G G A T C A C T G A C G T A C T G A C T G A G T C G A T C

RUNX1/MA0002.2/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CCGTGTGGCC-
GTCTGTGGTTT
 A T G C T G A C A T C G A C G T T C A G A C G T A T C G A T C G T A G C G T A C A C G T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CCGTGTGGCC
GGGGGTGTGTCC
 A C G T A C G T A T G C T G A C A T C G A C G T T C A G A C G T A T C G A T C G T A G C G T A C
T C A G C A T G C A T G A C T G A C T G A G C T A C T G A C G T A C T G C A G T A T G C A G T C