Information for 7-GGGTCATGCATAC (Motif 4)

A C T G C T A G A C T G C G A T A G T C C G T A A C G T A C T G G T A C C G T A A C G T C T G A A G T C
Reverse Opposite:
A C T G A G C T C G T A A C G T A C T G A G T C G T C A A C G T A C T G C G T A A G T C A G T C A G T C
p-value:1e-13
log p-value:-3.073e+01
Information Content per bp:1.926
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif1.1
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets30.5 +/- 12.8bp
Average Position of motif in Background67.1 +/- 9.6bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0153.1_Nr2f2_2/Jaspar

Match Rank:1
Score:0.65
Offset:-6
Orientation:forward strand
Alignment:------GGGTCATGCATAC
CGCGCCGGGTCACGTA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G A C T G C G A T A G T C C G T A A C G T A C T G G T A C C G T A A C G T C T G A A G T C
T A G C A C T G T G A C A C T G A G T C A T G C C T A G A C T G A C T G A C G T A G T C C T G A T A G C A C T G A G C T G C T A A C G T A C G T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:2
Score:0.64
Offset:-6
Orientation:forward strand
Alignment:------GGGTCATGCATAC
AGAGCGGGGTCAAGTA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G A C T G C G A T A G T C C G T A A C G T A C T G G T A C C G T A A C G T C T G A A G T C
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GGGTCATGCATAC
AGGTCA-------
 A C T G C T A G A C T G C G A T A G T C C G T A A C G T A C T G G T A C C G T A A C G T C T G A A G T C
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0057.1_Rxra_1/Jaspar

Match Rank:4
Score:0.61
Offset:-6
Orientation:reverse strand
Alignment:------GGGTCATGCATAC
NTNNNGGGGTCANGNNN--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G A C T G C G A T A G T C C G T A A C G T A C T G G T A C C G T A A C G T C T G A A G T C
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:5
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--GGGTCATGCATAC
AGRGGTCA-------
 A C G T A C G T A C T G C T A G A C T G C G A T A G T C C G T A A C G T A C T G G T A C C G T A A C G T C T G A A G T C
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MAFG::NFE2L1/MA0089.1/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GGGTCATGCATAC
--GTCATN-----
 A C T G C T A G A C T G C G A T A G T C C G T A A C G T A C T G G T A C C G T A A C G T C T G A A G T C
A C G T A C G T T C A G A C G T G A T C C G T A A G C T A T C G A C G T A C G T A C G T A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:7
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GGGTCATGCATAC--
-----ATGMATATDC
 A C T G C T A G A C T G C G A T A G T C C G T A A C G T A C T G G T A C C G T A A C G T C T G A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

PB0118.1_Esrra_2/Jaspar

Match Rank:8
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------GGGTCATGCATAC
GGCGAGGGGTCAAGGGC--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G A C T G C G A T A G T C C G T A A C G T A C T G G T A C C G T A A C G T C T G A A G T C
T A C G C A T G A T G C A C T G G C T A T A C G T C A G C A T G A C T G C G A T A G T C C T G A G C T A C T A G A T C G A T C G G T A C A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:GGGTCATGCATAC
-AGTCACGC----
 A C T G C T A G A C T G C G A T A G T C C G T A A C G T A C T G G T A C C G T A A C G T C T G A A G T C
A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T A C G T

PH0164.1_Six4/Jaspar

Match Rank:10
Score:0.57
Offset:-6
Orientation:reverse strand
Alignment:------GGGTCATGCATAC
TNNNNGGTGTCATNTNT--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C T A G A C T G C G A T A G T C C G T A A C G T A C T G G T A C C G T A A C G T C T G A A G T C
A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T A C G T A C G T