Information for 5-GAACTGCGTC (Motif 2)

A C T G C G T A C T G A A T G C A G C T A C T G G A T C A T C G A G C T A G T C
Reverse Opposite:
C T A G C T G A T A G C C T A G G T A C C T G A A T C G A G C T A C G T A G T C
p-value:1e-9
log p-value:-2.263e+01
Information Content per bp:1.847
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.60%
Number of Background Sequences with motif72.8
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets45.9 +/- 25.5bp
Average Position of motif in Background48.6 +/- 25.6bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:1
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GAACTGCGTC-
-AAYTAGGTCA
 A C T G C G T A C T G A A T G C A G C T A C T G G A T C A T C G A G C T A G T C A C G T
A C G T G C T A C G T A A G T C A C G T T C G A T A C G A C T G A G C T A G T C T C G A

SpiB(ETS)/OCILY3-SPIB-ChIP-Seq(GSE56857)/Homer

Match Rank:2
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------GAACTGCGTC
AAAGRGGAAGTG----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C T G A A T G C A G C T A C T G G A T C A T C G A G C T A G T C
C G T A C T G A C G T A C T A G T C G A C T A G A C T G C G T A C G T A T A C G A G C T A T C G A C G T A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--GAACTGCGTC
TGGAACAGMA--
 A C G T A C G T A C T G C G T A C T G A A T G C A G C T A C T G G A T C A T C G A G C T A G T C
C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A A C G T A C G T

MF0009.1_TRP(MYB)_class/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GAACTGCGTC
-AACCGANA-
 A C T G C G T A C T G A A T G C A G C T A C T G G A T C A T C G A G C T A G T C
A C G T C G T A C G T A T A G C A G T C C T A G G C T A G T A C G C T A A C G T

PB0149.1_Myb_2/Jaspar

Match Rank:5
Score:0.56
Offset:-4
Orientation:forward strand
Alignment:----GAACTGCGTC--
CGACCAACTGCCATGC
 A C G T A C G T A C G T A C G T A C T G C G T A C T G A A T G C A G C T A C T G G A T C A T C G A G C T A G T C A C G T A C G T
A G T C C A T G G T C A A G T C G A T C C G T A G T C A A G T C A G C T T C A G G A T C G A T C C T G A A G C T A T C G A G T C

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GAACTGCGTC
CCAACTGCCA-
 A C G T A C T G C G T A C T G A A T G C A G C T A C T G G A T C A T C G A G C T A G T C
A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A A C G T

MYB(HTH)/ERMYB-Myb-ChIPSeq(GSE22095)/Homer

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:GAACTGCGTC
YAACBGCC--
 A C T G C G T A C T G A A T G C A G C T A C T G G A T C A T C G A G C T A G T C
A G C T C G T A C G T A A G T C A G T C A C T G G A T C G A T C A C G T A C G T

Myb/MA0100.2/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-GAACTGCGTC
CCAACTGCCA-
 A C G T A C T G C G T A C T G A A T G C A G C T A C T G G A T C A T C G A G C T A G T C
A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A A C G T

PB0058.1_Sfpi1_1/Jaspar

Match Rank:9
Score:0.55
Offset:-7
Orientation:forward strand
Alignment:-------GAACTGCGTC
TTAAGAGGAAGTTA---
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C T G A A T G C A G C T A C T G G A T C A T C G A G C T A G T C
A G C T C G A T C G T A C G T A T C A G T C G A C T A G A C T G C G T A C G T A T A C G G A C T C G A T G T A C A C G T A C G T A C G T

PB0131.1_Gmeb1_2/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GAACTGCGTC-----
TNAACGACGTCGNCCA
 A C G T A C T G C G T A C T G A A T G C A G C T A C T G G A T C A T C G A G C T A G T C A C G T A C G T A C G T A C G T A C G T
C G A T C A G T T C G A C T G A G T A C T C A G G C T A T A G C A C T G C A G T A G T C C A T G T G A C A G T C G T A C G T C A