Information for 9-CATGGGGGCA (Motif 11)

A G T C C G T A A C G T A C T G A C T G A C T G A C T G A C T G A G T C C T G A
Reverse Opposite:
A G C T A C T G A G T C A G T C A G T C A G T C A G T C C G T A A C G T A C T G
p-value:1e-6
log p-value:-1.395e+01
Information Content per bp:1.960
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif9.3
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets54.8 +/- 25.3bp
Average Position of motif in Background36.6 +/- 18.2bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GCM2/MA0767.1/Jaspar

Match Rank:1
Score:0.72
Offset:0
Orientation:forward strand
Alignment:CATGGGGGCA
TATGCGGGTA
 A G T C C G T A A C G T A C T G A C T G A C T G A C T G A C T G A G T C C T G A
A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A

PB0201.1_Zfp281_2/Jaspar

Match Rank:2
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---CATGGGGGCA----
NNNATTGGGGGTNTCCT
 A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C T G A C T G A C T G A C T G A G T C C T G A A C G T A C G T A C G T A C G T
A G T C G C T A G C T A G C T A C G A T C G A T A C T G A C T G A C T G C A T G A C T G A G C T G T A C G C A T G T A C G T A C G C A T

INSM1/MA0155.1/Jaspar

Match Rank:3
Score:0.68
Offset:-2
Orientation:forward strand
Alignment:--CATGGGGGCA
TGTCAGGGGGCG
 A C G T A C G T A G T C C G T A A C G T A C T G A C T G A C T G A C T G A C T G A G T C C T G A
C A G T A C T G A G C T G T A C C G T A A C T G A T C G A C T G A C T G A C T G G A T C C T A G

THAP1/MA0597.1/Jaspar

Match Rank:4
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:CATGGGGGCA-
--TNNGGGCAG
 A G T C C G T A A C G T A C T G A C T G A C T G A C T G A C T G A G T C C T G A A C G T
A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

GCM1/MA0646.1/Jaspar

Match Rank:5
Score:0.68
Offset:0
Orientation:forward strand
Alignment:CATGGGGGCA-
CATGCGGGTAC
 A G T C C G T A A C G T A C T G A C T G A C T G A C T G A C T G A G T C C T G A A C G T
A G T C T C G A G C A T T C A G G T A C C A T G A C T G A T C G A G C T T C G A A T G C

PB0076.1_Sp4_1/Jaspar

Match Rank:6
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--CATGGGGGCA-----
NNNAAGGGGGCGGGNNN
 A C G T A C G T A G T C C G T A A C G T A C T G A C T G A C T G A C T G A C T G A G T C C T G A A C G T A C G T A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

PB0024.1_Gcm1_1/Jaspar

Match Rank:7
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CATGGGGGCA---
NNNNATGCGGGTNNNN
 A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C T G A C T G A C T G A C T G A G T C C T G A A C G T A C G T A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

PB0057.1_Rxra_1/Jaspar

Match Rank:8
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--CATGGGGGCA-----
NTNNNGGGGTCANGNNN
 A C G T A C G T A G T C C G T A A C G T A C T G A C T G A C T G A C T G A C T G A G T C C T G A A C G T A C G T A C G T A C G T A C G T
T C G A C A G T A G C T C T G A G C T A T C A G C T A G A C T G A C T G A C G T A G T C C T G A G T A C T C A G C G T A T A G C G C T A

PB0128.1_Gcm1_2/Jaspar

Match Rank:9
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----CATGGGGGCA---
TGCGCATAGGGGAGGAG
 A C G T A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C T G A C T G A C T G A C T G A G T C C T G A A C G T A C G T A C G T
C G A T C A T G A T G C T A C G G T A C T C G A A G C T T C G A C A T G A C T G A C T G A C T G T C G A A T C G T C A G G T C A A C T G

YY1(Zf)/Promoter/Homer

Match Rank:10
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CATGGGGGCA
CAAGATGGCGGC-
 A C G T A C G T A C G T A G T C C G T A A C G T A C T G A C T G A C T G A C T G A C T G A G T C C T G A
T A G C C G T A C T G A T A C G C G T A A C G T A C T G A C T G A G T C T A C G C T A G G T A C A C G T